Transcript Information: R_Transcript_72237.p1


Annotated TAIR IDAT3G45590.1
Annotated Gene Namesplicing endonuclease 1
Annotated Gene Symbol(s)ATSEN1, SEN1
Annotation TypeOrtholog
Chromosome Positionchr3:16733062-16733775 | Forward length=237
E-Value3E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.282235646981
Replicate 29.7188115464087
Replicate 310.803177556264
Condition 2: 8 Hour
Replicate 113.258721630823
Replicate 213.182179251354
Replicate 314.901758937261
Condition 3: 24 Hour
Replicate 112.230796863668
Replicate 29.2458727226874
Replicate 313.572288495805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72237.p1 GENE.R_Transcript_72237~~R_Transcript_72237.p1 ORF type:complete len:229 (+),score=41.90,tRNA_int_endo|PF01974.13|3.5e-21,tRNA_int_endo_N|PF02778.10|2.7e-10,tRNA_int_endo_N|PF02778.10|3.8e+03 R_Transcript_72237:2373-3059(+)
ATGTCAGAGATTGTATCAGCACTTCGATCATCACTAACCAAGTCAAACCCTGAGGGTTTAATATCGGGAGGTAGTGTTCTTCTTGAAACAGATCCAGAGCAATCTGAGCTACTGAACCGTGCATGTTTTGGCCGTCAAATTGTCACAAGCGAGAATGATAAGCAATGGTATGAATTGGGTCTGGAGGAGGCTTTTTATTTGTGTTATGAGTTGGAGTGTTTGAAGATTGTTGAAAATGACGGAGTTGTGAAAGGTGATACAGAGTTGTGGCATTACATGAGTTCAAAAGTAGAAATGTTTCCTGAATTTTACAAGGCCTATTCTCATCTTAGGAGGAAGAATTGGGTAGTGAGGTCAGGATCCCAATATGGTGTAGACTATGTTGCTTATCGTCATCATCCATCTTTGGTCCATTCAGAATACGCTGTGCTCCTAATATCAGACAGAAATGATACTTCAAATGGCCGGTCAAAGCTGTGGTCTGATCTGTATTGTACAATTCGGCTTGCAGGTGGTGTTGCTAAGACATTGTTGGTACTACATATTCAGGGTGATGGTAGTAAGGCTGATTCTCCAAAATGTCTGGAGCATTATGAGGTTGAAGAGCGTACAATACGTAGATGGATTCCAGAACATAGTCGTGAAGGAAAAATCGATGTTAAATCTAATGATAAAACTAGGACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72237.p1 GENE.R_Transcript_72237~~R_Transcript_72237.p1 ORF type:complete len:229 (+),score=41.90,tRNA_int_endo|PF01974.13|3.5e-21,tRNA_int_endo_N|PF02778.10|2.7e-10,tRNA_int_endo_N|PF02778.10|3.8e+03 R_Transcript_72237:2373-3059(+)
MSEIVSALRSSLTKSNPEGLISGGSVLLETDPEQSELLNRACFGRQIVTSENDKQWYELGLEEAFYLCYELECLKIVENDGVVKGDTELWHYMSSKVEMFPEFYKAYSHLRRKNWVVRSGSQYGVDYVAYRHHPSLVHSEYAVLLISDRNDTSNGRSKLWSDLYCTIRLAGGVAKTLLVLHIQGDGSKADSPKCLEHYEVEERTIRRWIPEHSREGKIDVKSNDKTRT*

Click here to download the sequence:
Link to NCBI Protein BLAST