Transcript Information: R_Transcript_72244.p1


Annotated TAIR IDAT1G28140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9833029-9834390 | Reverse length=280
E-Value6.4E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5631174849298
Replicate 25.3786818967677
Replicate 39.0495753466281
Condition 2: 8 Hour
Replicate 17.4817920672138
Replicate 28.5578683589723
Replicate 311.708909319941
Condition 3: 24 Hour
Replicate 18.857178714392
Replicate 27.8282554704209
Replicate 39.32254088516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72244.p1 GENE.R_Transcript_72244~~R_Transcript_72244.p1 ORF type:complete len:324 (+),score=55.84,DUF2301|PF10063.5|1.6e+04,DUF2301|PF10063.5|1e-53 R_Transcript_72244:185-1156(+)
ATGACAATGATAGGGATAGAAACCAGAGGATTATTATGCATGGCGACTGGTTCTTTGCATCAATATCATGATCACCCCAGCTCAATTAATTTCAGTACAAAACTTGATTTAGGGTTTGGGGGTGGCCGGATTGTAAAGGCAATCAGGAAGCAATCTGGTACTTGTGCTTTCAAATTGGGGAAATCTAGTAGTTCATTGTTTCAGAATGTGCAAAAGAGTAGGACTGGGAAGCTTGTTGTAAGGTGCCAAGCAATGGAGCAAACCCGAACCGAAACCGAAAGCAAAGGGCAAACTGTTTATCAAGGTGTCTATGGTTCCTGGACTATCGACCCGTCCGACATCCGTGAGGTGATTTTGTATAGGAGTGGACTGGTAACAGCAGCTGGTTCCTTTGTCGTGGCTGGCTCTACAGCGTTTTTGCCTAAGGCTTCCTTTTTAAGCCAAACCCTGGAGCAAAATCTTGATTTATTTTTTGTATTGGGAGCAGCTGGGCTGGGTGTCTCTCTATACTTGATTCACATCTATGTAACGGAAATCAAGCGCACCCTCCAAGCCCTCTGGGCGTTGGGTGTTATTGGTTCTCTAGCTACCTATGGCAGCCTTGCTCGACCTTCTCATGAGGGCCTGGTACAATATGTTGTTGATAATCCAACTGCCGTCTGGTTTGTTGGTCCTCTTTTTGCTGCCCTAACGGGACTGGTTTTCAAGGAAGGCCTCTGTTATGGCAAGATAGAAGCTGGGGTACTTGCTTTCCTAATACCAACCATTCTTCTTGGTCATCTGACTGGTCTAATGGATGATGGAGTTAAGTTGAGCCTCCTAGGTTTGTGGATGGCCCTTATCATGATTTTTGCTGGAAGGAAATTCACTCAACCTGTCAAGGATGACATTGGTGACAAGTCTGTCTTCATGTTCAATGCTCTTGCGGAAGATGAGAAGGCAGCTTTGCTTGCAAAGCTTGAACAACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72244.p1 GENE.R_Transcript_72244~~R_Transcript_72244.p1 ORF type:complete len:324 (+),score=55.84,DUF2301|PF10063.5|1.6e+04,DUF2301|PF10063.5|1e-53 R_Transcript_72244:185-1156(+)
MTMIGIETRGLLCMATGSLHQYHDHPSSINFSTKLDLGFGGGRIVKAIRKQSGTCAFKLGKSSSSLFQNVQKSRTGKLVVRCQAMEQTRTETESKGQTVYQGVYGSWTIDPSDIREVILYRSGLVTAAGSFVVAGSTAFLPKASFLSQTLEQNLDLFFVLGAAGLGVSLYLIHIYVTEIKRTLQALWALGVIGSLATYGSLARPSHEGLVQYVVDNPTAVWFVGPLFAALTGLVFKEGLCYGKIEAGVLAFLIPTILLGHLTGLMDDGVKLSLLGLWMALIMIFAGRKFTQPVKDDIGDKSVFMFNALAEDEKAALLAKLEQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST