Transcript Information: R_Transcript_72245.p1


Annotated TAIR IDAT1G28140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9833029-9834390 | Reverse length=280
E-Value3.9E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0267290537029
Replicate 20.13122687760186
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 10.30607331184057
Replicate 21.3975551150741
Replicate 30.56723783188709
Condition 3: 24 Hour
Replicate 11.7218355420778
Replicate 22.2055258890577
Replicate 30.95758708005176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72245.p1 GENE.R_Transcript_72245~~R_Transcript_72245.p1 ORF type:5prime_partial len:160 (+),score=17.03,DUF2301|PF10063.5|6.5e+03,DUF2301|PF10063.5|1.1e-34 R_Transcript_72245:2-481(+)
TCCTTTTTAAGCCAAACCCTGGAGCAAAATCTTGATTTATTTTTTGTATTGGGAGCAGCTGGGCTGGGTGTCTCTCTATACTTGATTCACATCTATGTAACGGAAATCAAGCGCACCCTCCAAGCCCTCTGGGCGTTGGGTGTTATTGGTTCTCTAGCTACCTATGGCAGCCTTGCTCGACCTTCTCATGAGGGCCTGGTACAATATGTTGTTGATAATCCAACTGCCGTCTGGTTTGTTGGTCCTCTTTTTGCTGCCCTAACGGGACTGGTTTTCAAGGAAGGCCTCTGTTATGGCAAGATAGAAGCTGGGCTACTTGCTTTCCTGATACCAACCATTCTTCTTGGTCATCTGGTACTGTTTATGCATTTTTTAAATAGTATTCAACCTTTTGATTCAGTGACCAATTTCTTAAACTATAGCATCGAACTTTGCCAGCTGAAACCAGTGGCTTTCATCATTGTACAGCAAGCTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72245.p1 GENE.R_Transcript_72245~~R_Transcript_72245.p1 ORF type:5prime_partial len:160 (+),score=17.03,DUF2301|PF10063.5|6.5e+03,DUF2301|PF10063.5|1.1e-34 R_Transcript_72245:2-481(+)
SFLSQTLEQNLDLFFVLGAAGLGVSLYLIHIYVTEIKRTLQALWALGVIGSLATYGSLARPSHEGLVQYVVDNPTAVWFVGPLFAALTGLVFKEGLCYGKIEAGLLAFLIPTILLGHLVLFMHFLNSIQPFDSVTNFLNYSIELCQLKPVAFIIVQQAL*

Click here to download the sequence:
Link to NCBI Protein BLAST