Transcript Information: R_Transcript_72260.p1


Annotated TAIR IDAT5G48310.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19574961-19580362 | Reverse length=1156
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8684488027676
Replicate 24.0245763440702
Replicate 34.4468218171976
Condition 2: 8 Hour
Replicate 12.196937311743
Replicate 21.7144558671056
Replicate 32.339277714536
Condition 3: 24 Hour
Replicate 16.9847162283309
Replicate 25.9545601083043
Replicate 37.9267054494147


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72260.p1 GENE.R_Transcript_72260~~R_Transcript_72260.p1 ORF type:complete len:1226 (+),score=241.58 R_Transcript_72260:217-3678(+)
ATGGCACCACACACATTGCCCCCACTCAAGTTCCATTCTGGTTTGCTGAGTACACGTAGTGTAGCTAGTCTTTGTCTGTCTAATTCTGATGAGCTTAGTGTTAGTAATTACAGTGATGAAGATGGTGATGAAAGTGTTGCTTCAGCACCTTATGATGATGATGATGATCTGGATGGTTGTTATTCTGAGAAACTCAACCATCATTTTTCGAGGTTTAATGATGTTGAGCACATGAGGAAGCTCAGTTCTCTTGCACACGGTAAAGAAAACGATGGTTTAAGAGTGGTCTCCAATATGGGAAGTAGACAAAATGCACCATTGATTAATAGAGGAATGTCAAAGATTAATCTTAAAGTTGAATTGTCAGAAACTGTCAGGAGATTCAGTGATATGGGGTATACTGAGCAGTTTATGACTCCAGATAGTTGCATTCGGCCTCCTGTTAGTTCACACCCGCTTAGCATGCAGGGAACACCCATTCGCCATAGCAAGTATTATGATGCCGCAGACCTGGGAACTCCCAGCGCTCCTCCTGTCAATCCTAGTGAGAAGGAGGGGCACGAGCCTGAAGATGAAGTGGAACAAGCAACTACTTTGAATGATATAATGGGTGTGCATTCAGGCAGCGGATTATACATGCCTAGAGTTGGCGATTATTGTACTGAGACTGAACATATTTTGTCCAAAGGAAAAGCAGAAAGTTGGATAAACAGTGAACTGAATGGGAGAGAAAATGATATCGGCACTGTAGTGGAAGAGGAAACACTACCTGACTGTACCGTGAACTCAGTGGACACTTTGCCTTGTTTTAGCATAAGTGGACAAAATGCCTGGCAAACTCTTGTAGCATATGATGCCTGTGTTAGGCTATGCCTGCATGCATGGACGAAAGGCTGCCCAGATGCACCTGAGTTTCTACGTGATGGATGCGTTGTCCTCTGGACTGCTTTTGGGTTAAACAAGTTTTTGCTACATCCTCAAGGCAGTCAAGCAGTAAAATGTGGGGTTTCTAAGAGTGAAGAAAATACTTACTCTTCAAAATCAAAAAAAGTGGTTGGCAAGATCAGGGTTGAAGTGAAAAAGCTAAGAATCATTCCAAGAAGGAAACTCAAGAGCACATACTCCCAACGAGGTGCATTTTACATGCAAGCAGGGACAGAGTATGTTCGACAGGTTTCATCAATTGTGAAAAGTGGCATCAATTCATTGATGAACTCATCATTACCAGTGACTTATGAAGACAAACTTTCATGCTTGTTCCTCATGAAGAGCTCCATAGAGGATGTTCAAATGGATTATGGTTCTGCTATATGCTTACATCCAGGAACTGGAGATTACCATGACTTCTTTCCCGAAAGTCAAGGGGATAAACTTCTGATAGAAGTTCAAGATGCAAAACAAATTACCCATGGTCAAGCTGTAATCCCATTTTCGATGATAGCTGAGAATCCTAATGATAAAATTCGATGGTGGCCAATCTACCATGACGAACACGAATGTGTCGGGAAGATCCAACTTGTCATAACAAGTTCGATCACAAATGAAGAGGATAATATAAAGAGTGGCTTGGTTGTGGAAACTGCTGCTTATGATTTATTGCTGGAAGCTGCCATGCGTGCACAACACTTCCATTCTCGAAATTTACATTTGCATGGGCCTTGGAAGTGGTTGCTTAGTGAATTTGCAGACTATTATGGAGTGTCTGATTCTTACACTAAGCTAAGGTATTTATCATATGTAATGAATGTGGCTACACCAACAAAAGATTGCTTGGAGCTCGTGCTGCATTTGCTTATGCCTGTTATGAAAGAGAGAAGTGAAAAAACATTGAATAGACAAGAGAAAAGTATTCTGTTGGAATGTGAAACACAAGTTGAGAGTCTCTTAGCAAATGTTTTTGAAAACTACAAATCATTGGATGAACTCTCTTCCATGGGATTGTCAGACTCCCTCACCCCGATACCAGAGACTGCTGCTCCAGCTTTGGCTCCCGCTGTGGAAGTCTTTTGCCTTCTTCATGATATTCTTACGCAAGATGCACAGACAATTTTGCGAAAGTATTTACAGAGAGCAGGTCAGAAGAGGTGTCGAAGGCATATGGTAGAGACTGATGAGCTTCTGTCGACAAACTCTGACAATGCACTGACAGACCCTGTATCCATCTCCACGGCATATTTGAAGATGAAGAACCTTTGCAGAAATATAAGCAGTGAAATCCTTGCAGACATCAGAATCCACAATCAGCATTTACTTCCCAGTTCCATTGACCTGTCGAACCTTGCTGCCGCTGTTTATAGCACGGAATTGGCAAAGAGGCTCAAAGGGTTCCTGGCTGCTTGTCCTCCATCCAGTCCTTTGCCACATGTGAATGAACTTTTGGCAGCAACTTCTGATTTTGAGAGGGATCTTGAATCGTGGAATATCAGTCCCATTCAAGATGGTGTAGATTGCAAGGACTTGTTCCATCATTACATAATGGTATGGGTACAGGAGATGCAACTTGGATTGCTTGATCTCTGCAAGGCAGAAAAGGTGCCATGGTCTGGAATAATTACAAATCATTCAACATCGCCCTTCGTAGAGAATATGTATTTGAAGATAAAGGATGCCCTCACTCAATATGACATGGTGATCAGCCGGTGGCCTCAATACACTTTGCCATTGGAAAACGCTACTGCTGATGTTGAGAGAGCAATCATAAAGGCACTGGAAAAGCAGTATAATGAGATCTTAGCTCCTTTGAAAGATAGCATCCCGAAGAAGCTTGGTATGCAGGTTCAGAAATTAGCTAGAAGGCAATCAACAACGCTCTATGTTGTCTCTAATCAACTAGGTACCTTTCTGAACACAATCAAGAGGATTCTTGATGTTCTTCATTGTAGAGTTGAAGATATCCTGAAATCCTGGGCTTCATGTTTGCCTGTTATTGGGGAGAAAAAGTCATCCTTTGGGGAGCAGATGAATGGGATTACTGTGCTTCTGAGGACAAAGTACAAAAACTACATGCAAGCTACAGTGTCAAAGCTTTACAGCAATATGCAAGCTAGCCGAAGCACGCAACTGAAGAAAATCCTCGAGGAAACACAAGACTCCGATGGAGAGGCAGAGGTCCGCGAGAGAATGCAGATGCTGAGTTCTCAACTCATTGATTCCATATCGAACTTGCATGAGGTTTTTACGAATCAAATATTTATTGCACTGTGTTGTGGCTTTTGGGATAAAATGGGACAGAGTGTATTGAAGTTTTTGGAGGGAAGGAAAGAGAACCGGGTGTGGTACAAAGGATCATATTATGCTCTTGGGATCCTAGATGATACATTTGCTTCCCAGATGCAGCGTTTGCAAGGCAATTCCCTTAAGGAGAAAGATCTGGAGCCCCCGCGATCTGTGGTGGAGGCTCGCTCTATTCTTTGTAGAGATGCAACAAATGGAACAGATCAATCCACTTATTTCTATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72260.p1 GENE.R_Transcript_72260~~R_Transcript_72260.p1 ORF type:complete len:1226 (+),score=241.58 R_Transcript_72260:217-3678(+)
MAPHTLPPLKFHSGLLSTRSVASLCLSNSDELSVSNYSDEDGDESVASAPYDDDDDLDGCYSEKLNHHFSRFNDVEHMRKLSSLAHGKENDGLRVVSNMGSRQNAPLINRGMSKINLKVELSETVRRFSDMGYTEQFMTPDSCIRPPVSSHPLSMQGTPIRHSKYYDAADLGTPSAPPVNPSEKEGHEPEDEVEQATTLNDIMGVHSGSGLYMPRVGDYCTETEHILSKGKAESWINSELNGRENDIGTVVEEETLPDCTVNSVDTLPCFSISGQNAWQTLVAYDACVRLCLHAWTKGCPDAPEFLRDGCVVLWTAFGLNKFLLHPQGSQAVKCGVSKSEENTYSSKSKKVVGKIRVEVKKLRIIPRRKLKSTYSQRGAFYMQAGTEYVRQVSSIVKSGINSLMNSSLPVTYEDKLSCLFLMKSSIEDVQMDYGSAICLHPGTGDYHDFFPESQGDKLLIEVQDAKQITHGQAVIPFSMIAENPNDKIRWWPIYHDEHECVGKIQLVITSSITNEEDNIKSGLVVETAAYDLLLEAAMRAQHFHSRNLHLHGPWKWLLSEFADYYGVSDSYTKLRYLSYVMNVATPTKDCLELVLHLLMPVMKERSEKTLNRQEKSILLECETQVESLLANVFENYKSLDELSSMGLSDSLTPIPETAAPALAPAVEVFCLLHDILTQDAQTILRKYLQRAGQKRCRRHMVETDELLSTNSDNALTDPVSISTAYLKMKNLCRNISSEILADIRIHNQHLLPSSIDLSNLAAAVYSTELAKRLKGFLAACPPSSPLPHVNELLAATSDFERDLESWNISPIQDGVDCKDLFHHYIMVWVQEMQLGLLDLCKAEKVPWSGIITNHSTSPFVENMYLKIKDALTQYDMVISRWPQYTLPLENATADVERAIIKALEKQYNEILAPLKDSIPKKLGMQVQKLARRQSTTLYVVSNQLGTFLNTIKRILDVLHCRVEDILKSWASCLPVIGEKKSSFGEQMNGITVLLRTKYKNYMQATVSKLYSNMQASRSTQLKKILEETQDSDGEAEVRERMQMLSSQLIDSISNLHEVFTNQIFIALCCGFWDKMGQSVLKFLEGRKENRVWYKGSYYALGILDDTFASQMQRLQGNSLKEKDLEPPRSVVEARSILCRDATNGTDQSTYFYY*

Click here to download the sequence:
Link to NCBI Protein BLAST