Transcript Information: R_Transcript_72261.p1


Annotated TAIR IDAT2G25140.1
Annotated Gene Namecasein lytic proteinase B4
Annotated Gene Symbol(s)HSP98.7, CLPB-M, CLPB4
Annotation TypeOrtholog
Chromosome Positionchr2:10697877-10701998 | Reverse length=964
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.238241553609
Replicate 28.3224772273858
Replicate 39.8171732554939
Condition 2: 8 Hour
Replicate 110.272239117707
Replicate 210.932986493779
Replicate 313.677622087193
Condition 3: 24 Hour
Replicate 113.026361445096
Replicate 211.07200622374
Replicate 313.057755411801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72261.p1 GENE.R_Transcript_72261~~R_Transcript_72261.p1 ORF type:complete len:994 (+),score=224.59,AAA_2|PF07724.10|0.21,AAA_2|PF07724.10|1.1e+03,AAA_2|PF07724.10|4.4e-54,AAA|PF00004.25|2.8e-13,AAA|PF00004.25|6.2e-10,Clp_N|PF02861.16|2.7e-13,Clp_N|PF02861.16|1.9e-09,ClpB_D2-small|PF10431.5|3.2e+03,ClpB_D2-small|PF10431.5|2.3e-21,AAA_5|PF07728.10|0.0099,AAA_5|PF07728.10|8.9e+03,AAA_5|PF07728.10|6.8e-12,AAA_16|PF13191.2|3.6e+03,AAA_16|PF13191.2|9.2e-05,AAA_16|PF13191.2|3.2e+02,AAA_16|PF13191.2|0.11,AAA_16|PF13191.2|6.1e+03,Sigma54_activat|PF00158.22|0.18,Sigma54_activat|PF00158.22|1.2e-06,AAA_22|PF13401.2|0.0088,AAA_22|PF13401.2|0.064,IstB_IS21|PF01695.13|0.013,IstB_IS21|PF01695.13|0.055,AAA_17|PF13207.2|51,AAA_17|PF13207.2|0.00016,AAA_14|PF13173.2|0.091,AAA_14|PF13173.2|6.6e+03,AAA_14|PF13173.2|0.082,AAA_18|PF13238.2|0.056,AAA_18|PF13238.2|2.1e+03,AAA_18|PF13238.2|0.072,AAA_18|PF13238.2|8.7e+03 R_Transcript_72261:191-3172(+)
ATGGCTACCAAAATCAGTACTGCAAGGAGACTAACAAGGTCAGCTTATAGTTATGCCACTTTAACTGCCTCCAAACCCTCCAAAACCTCATCTTTTGTTTACCCTTTTGCCAATTCTCCTTCTCCAAACCTTTCTTCTACTGATCACTCTTCTGGGTCTGCCATTTTTCCTACCAATTTGGGGTTCAAACCAAATGGGGTTGTGCCAAAACTAAGTAATATCGAGTTGGTTAATAGTATTGGGTCTAATGGCTTTCTGCGTCACCGTTTTTACTCTACTTCCGCTCCTTCTGCTAGCTCTGGTCAGATTAATCAAACTGAATTTACTGAGATGGCATGGGAGGGGATGGTTGGTGCTGTTGAAGCTGCACGAGTGAGCAAGCAACAAATTGTTGAGACTGAACACTTGATAAAGGCCCTTTTAGAGCAAAAGGATGGTTTGGCTCGTAGAATATTGACCAAGGTTGGGCTTGATAATTCGTCAGTTTTGCAAGCTGTAGACGACTTTATATCCAAACAACCCAAGGTCGTAGGGGATACAAGTGGACCTATTTTGGGAACAAACCTTGTTTCCCTCTTGGATAGAGCTCGAAAGCACAAGAAATCAATGGGTGATGACTTTGTATCCGTGGAGCATTTGGTGCTGGCATTTCATTCGGATCCAAGGTTTGGGCAACAACTATTCCAAAATTTTCAGCTGAAAGAGAAGGATTTGAAGGATGCCATTCAAGGTGTCCGTGGAAGTCAAAGGGTAACAGACCAAAACCCAGAGGGAAAATATGAAGCACTGGAGAAGTATGGAAGTGACTTAACCGAGTTAGCCAGGCGTGGTAAACTTGATCCTGTTATTGGCAGAGATGATGAAATTCGGCGCTGCATCCAAATTTTGTCAAGACGAACCAAAAATAATCCTGTAATTATTGGTGAGCCTGGAGTGGGTAAAACAGCAATAGCTGAAGGATTAGCTCAACGTATCGTGCGTGGGGATGTCCCTGAGCCCCTGATGAATCGAAAGTTGATCTCTCTGGATATGGGTGCTCTGCTTGCTGGGGCTAAATTTCGTGGTGATTTTGAGGAGAGACTTAAAGCCGTCCTTAAGGAAGTTAGTGCTTCAAATGGGCAGATAATTCTGTTTATAGATGAAATTCACACTGTTGTTGGAGCAGGGGCTACTGGAGGCGCAATGGATGCTGGAAACTTGCTGAAACCAATGCTTGGACGAGGCGAGCTCCGGTGTATTGGTGCCACCACCTTGAATGAGTACAGGAAATATATTGAAAAGGATCCTGCTCTCGAGCGTAGATTCCAGCAAGTGTTTTGTGGCCAGCCATCTGTAGAGGACACAATCTCCATTCTTCGTGGTTTACGAGAACGCTATGAACTGCATCATGGTGTTAAGATATCTGATGGAGCTCTTGTTGCTGCTGCTGTTCTTTCAGATCGATACATAACCGAGCGGTTTTTACCTGACAAAGCCATTGATCTAGTTGATGAAGCTGCTGCTAAGCTGAAAATGGAGATAACATCCAAGCCTACGGAGTTAGATGAGATTGATAGAGCTGTGCTCAAATTAGAGATGGAGAAGCTATCATTGAAAAATGATACTGATAAAGCATCGAAAGAGCGGCTTAACAAGTTGGAAAGTGATCTAAGCTTACTAAAAGAGAAGCAGAAGGAGCTAAATGAACAATGGGAAAGTGAGAAGGTTCTTATGAATCGTATCCGGTCAATCAAAGAAGAGATTGACAGAGTGAATCTGGAGATGGAAGCTGCTGAACGTGAGTATAACCTGAGCCGTGCTGCTGAGCTCAAGTATGGAACACTGATGACTCTTCAACGGCAGCTTGAAGAGGCTGAAAAGAATCTAGCAGAATATCGGGAGTCTGGAAAATCTTTACTTCGAGAAGAGGTCACCGACATAGATATTGCTGAAATTGTTAGCAAGTGGACTGGCATACCCTTATCAAACCTGCAACAGTCAGAGCGAGAAAAGTTGGTCCTGCTTGAAGAGGTTCTTCACAAAAGGGTCATTGGCCAGGACATGGCTGTCAAATCTGTGGCTGATGCAATCCGACGCTCAAGGGCCGGATTATCTGACCCAAATCGACCTATAGCGAGTTTTATGTTTATGGGGCCCACAGGTGTAGGAAAGACCGAGCTTGCTAAAGCTTTGGCTTCATACCTATTTAACACTGAAAATGCCCTTGTCCGAATAGATATGAGTGAGTACATGGAAAAGCATGCTGTCTCCCGGCTGGTTGGTGCACCCCCCGGTTATGTTGGATACGAGGAAGGAGGGCAGCTCACTGAAATTGTGCGACGAAGACCTTACTCAGTTGTCCTGTTTGATGAAATTGAGAAAGCTCATCATGACATCTTCAACATCTTGTTACAATTACTGGACGATGGACGTATTACTGACGCTCAGGGAAGAACTGTCAGCTTTACTAATTGTGTCGTAATTATGACATCTAATATTGGGTCCCATTACATCCTGGAAACTTTACGGAATACACAAGACAGTAAGGATGCAGTTTATGACATGATGAAAAGGCAGGTTGTAGAGTTAGCCAGACAAACATTCCGTCCTGAATTCATGAATCGAATTGATGAGTACATCGTCTTCCAGCCTCTTGACTCTAAGGAAATCAGCAGAATCGTCGAGTTGCAGCTATATCGAGTGAAAGACAGGCTTAAGCAAAGGAAAATCGATCTTCATTACACGAGGGAAGCTGTTGAGCTGCTTGGGATGTTGGGCTTTGACCCCAACTATGGAGCTCGCCCAGTCAAGAGGGTAATACAGCAAATGGTTGAGAATGAAATAGCGATGGGGGTTCTGAGGGGAGATTTCAAGGAAGAGGACTCCCTGATAGTTGATGCGGATACCTCACCCTTGGCTAAAGACCTTCCTCCACAGAACAAGTTGGTCATTAGAAAATCGGAGAGCAGTCCTGCAGAAGAGGTAATGGTTGCAAATGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72261.p1 GENE.R_Transcript_72261~~R_Transcript_72261.p1 ORF type:complete len:994 (+),score=224.59,AAA_2|PF07724.10|0.21,AAA_2|PF07724.10|1.1e+03,AAA_2|PF07724.10|4.4e-54,AAA|PF00004.25|2.8e-13,AAA|PF00004.25|6.2e-10,Clp_N|PF02861.16|2.7e-13,Clp_N|PF02861.16|1.9e-09,ClpB_D2-small|PF10431.5|3.2e+03,ClpB_D2-small|PF10431.5|2.3e-21,AAA_5|PF07728.10|0.0099,AAA_5|PF07728.10|8.9e+03,AAA_5|PF07728.10|6.8e-12,AAA_16|PF13191.2|3.6e+03,AAA_16|PF13191.2|9.2e-05,AAA_16|PF13191.2|3.2e+02,AAA_16|PF13191.2|0.11,AAA_16|PF13191.2|6.1e+03,Sigma54_activat|PF00158.22|0.18,Sigma54_activat|PF00158.22|1.2e-06,AAA_22|PF13401.2|0.0088,AAA_22|PF13401.2|0.064,IstB_IS21|PF01695.13|0.013,IstB_IS21|PF01695.13|0.055,AAA_17|PF13207.2|51,AAA_17|PF13207.2|0.00016,AAA_14|PF13173.2|0.091,AAA_14|PF13173.2|6.6e+03,AAA_14|PF13173.2|0.082,AAA_18|PF13238.2|0.056,AAA_18|PF13238.2|2.1e+03,AAA_18|PF13238.2|0.072,AAA_18|PF13238.2|8.7e+03 R_Transcript_72261:191-3172(+)
MATKISTARRLTRSAYSYATLTASKPSKTSSFVYPFANSPSPNLSSTDHSSGSAIFPTNLGFKPNGVVPKLSNIELVNSIGSNGFLRHRFYSTSAPSASSGQINQTEFTEMAWEGMVGAVEAARVSKQQIVETEHLIKALLEQKDGLARRILTKVGLDNSSVLQAVDDFISKQPKVVGDTSGPILGTNLVSLLDRARKHKKSMGDDFVSVEHLVLAFHSDPRFGQQLFQNFQLKEKDLKDAIQGVRGSQRVTDQNPEGKYEALEKYGSDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLMNRKLISLDMGALLAGAKFRGDFEERLKAVLKEVSASNGQIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALERRFQQVFCGQPSVEDTISILRGLRERYELHHGVKISDGALVAAAVLSDRYITERFLPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLNKLESDLSLLKEKQKELNEQWESEKVLMNRIRSIKEEIDRVNLEMEAAEREYNLSRAAELKYGTLMTLQRQLEEAEKNLAEYRESGKSLLREEVTDIDIAEIVSKWTGIPLSNLQQSEREKLVLLEEVLHKRVIGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALASYLFNTENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEIVRRRPYSVVLFDEIEKAHHDIFNILLQLLDDGRITDAQGRTVSFTNCVVIMTSNIGSHYILETLRNTQDSKDAVYDMMKRQVVELARQTFRPEFMNRIDEYIVFQPLDSKEISRIVELQLYRVKDRLKQRKIDLHYTREAVELLGMLGFDPNYGARPVKRVIQQMVENEIAMGVLRGDFKEEDSLIVDADTSPLAKDLPPQNKLVIRKSESSPAEEVMVAND*

Click here to download the sequence:
Link to NCBI Protein BLAST