Transcript Information: R_Transcript_72339.p3


Annotated TAIR IDATCG00120.1
Annotated Gene NameATP synthase subunit alpha
Annotated Gene Symbol(s)ATPA
Annotation TypeOrtholog
Chromosome PositionchrC:9938-11461 | Reverse length=507
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.067237113172
Replicate 216.119207012512
Replicate 315.376373071433
Condition 2: 8 Hour
Replicate 122.895247736105
Replicate 212.192843051198
Replicate 312.684688524089
Condition 3: 24 Hour
Replicate 111.478903613852
Replicate 212.547184683813
Replicate 314.261476872762


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72339.p3 GENE.R_Transcript_72339~~R_Transcript_72339.p3 ORF type:complete len:508 (+),score=25.47,ATP-synt_ab|PF00006.21|1.6e+03,ATP-synt_ab|PF00006.21|6.4e-76,ATP-synt_ab_C|PF00306.23|2.5e+03,ATP-synt_ab_C|PF00306.23|5.1e-21,ATP-synt_ab_N|PF02874.19|7.5e-16,HAS-barrel|PF09378.6|1.5e-06 R_Transcript_72339:11353-12876(+)
ATGGTAACCATTCGAGCAGACGAAATTAGCAATATTATCCGTGAACGTATTGAACAATATAATCGAGAAATAAAGATTGTAAATACGGGTACCGTACTTCAAGTAGGGGACGGCATTGCTCGTATTCATGGCCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAAGGAACAATAGGTATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGTTTGCTGATACAGGAAGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCACAGATACCCGTGAGTGAGGCTTATTTAGGTCGTGTTGTAAATGCTTTAGCTAAACCCATTGATGGTAGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCTCCCGCCCCCGGTATTATTTCGAGACGTTCTGTATATGAGCCTCTTCAAACCGGGCTTATTGCTATTGATTCGATGATCCCTATAGGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACTGGTAAAACGGCAGTAGCTACAGATACGATTCTTAATCAACAAGGACAAAATGTAATATGCGTTTATGTAGCTATTGGCCAAAAAGCGTCTTCCGTGGCGCAGGTAGTTACTACCTTTCAGGAAAGGGGAGCAATGGAATACACTATTGTGGTAGCTGAAACGGCAGATTCCCCTGCTACATTACAGTACCTTGCCCCTTATACCGGAGCGGCGCTGGCTGAATATTTTATGTACCGTGAACGACACACTTTAATCATTTATGATGATCTTTCCAAACAAGCACAAGCTTATCGACAAATGTCTCTTCTATTACGAAGACCGCCAGGCCGTGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCGTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTAGAGACCCAATCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGGCCAGCTATTAATGTGGGTATTTCTGTTTCCAGGGTAGGATCCGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGGAAATTAAAATTGGAATTGGCCCAATTCGCAGAATTAGAAGCCTTTGCGCAGTTTGCTTCTGATCTTGATAAGGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAATTGCTAAAACAACCCCAATCTGCCCCTCTTACGGTAGAGGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTCGATTCATTAGAAATTGGGCAGGTAAGGAAATTTCTTGTTGAATTACGTACTTACCTAAAAACGAATAAACCGCAGTTTCAAGAAATTATATCTTCTACCAAGACATTTACGGAAGAAGCGGAAGCCCTTTTAAAAGAAGCTATTCAAGAACAGATGGAACGCTTTCTACTTCAAGAACAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72339.p3 GENE.R_Transcript_72339~~R_Transcript_72339.p3 ORF type:complete len:508 (+),score=25.47,ATP-synt_ab|PF00006.21|1.6e+03,ATP-synt_ab|PF00006.21|6.4e-76,ATP-synt_ab_C|PF00306.23|2.5e+03,ATP-synt_ab_C|PF00306.23|5.1e-21,ATP-synt_ab_N|PF02874.19|7.5e-16,HAS-barrel|PF09378.6|1.5e-06 R_Transcript_72339:11353-12876(+)
MVTIRADEISNIIRERIEQYNREIKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMERFLLQEQA*

Click here to download the sequence:
Link to NCBI Protein BLAST