Transcript Information: R_Transcript_72350.p1


Annotated TAIR IDAT1G18660.4
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6421433-6425489 | Forward length=491
E-Value5E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.911692973547
Replicate 23.439666962397
Replicate 34.9253394831317
Condition 2: 8 Hour
Replicate 15.0977398013036
Replicate 24.7316541779983
Replicate 36.442892506895
Condition 3: 24 Hour
Replicate 18.1488462514718
Replicate 23.7636960564125
Replicate 36.3496754211136


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72350.p1 GENE.R_Transcript_72350~~R_Transcript_72350.p1 ORF type:complete len:293 (+),score=46.31,zf-C3HC4_3|PF13920.2|4.2e-09,zf-C3HC4|PF00097.21|1.9e-08,zf-C3HC4_2|PF13923.2|2.7e-08,zf-RING_2|PF13639.2|1.5e-07,zf-RING_5|PF14634.2|4.1e-07,TPR_11|PF13414.2|3.9e-06,TPR_11|PF13414.2|5.6e+02,zf-C3HC4_4|PF15227.2|9e-07 R_Transcript_72350:233-1111(+)
ATGTCCGGCGATGAGAATTCGTTGATCGGCGACTTCTTCGACGGCATCGACGATGTTGAAGAGTTCCTCTGTGCGAATGAGGGAGGGGTTTCCATGTCAATTGATAGATTCCGTCAGGTTTTCGAGTTTGTACAGTCCGGTAATCAAGCCTTTCGTGCTTCTCGTTTTGAAGAGGCAATTAATTGTTACTCAACAGCAAATGTCATGAAACCAGGCGATCCTATCATTCTGAGCAATAGATGTGCTGCATATATAAGGTTGAGCCAATTTTTGAAAAGCAGGCCATCTACTGCTTCTGAAAGCAGTCCGTTGTATGGGCTGGATCCTACAACTCATGCCGAGCTGGAAAGATATAAGCTGGCGCGTGATGTTGCTTTGTCTGGCCTTCAGCTTGATCCTCTCAGCAATCATCTGCAGGCCCTTCTTCGGATTTTGGAGAAAATACTTACTGGTTCGATGGGGGCCAAAAGCCGTGTGAAACCAGAACGTAATGATGATTTTGATTGTACCCTTTGCCTGAAGCTGCTATATGAGCCAATAACAACCCCCTGTGGGCATTCTTTTTGTCGTTCATGTCTATTTCAGTCAATGGATCAAAGTAATAAATGTCCCCTTTGCCGAACTGTGCTATTTATTACTCCGAGGACATGTGCTATCAGTGTGACACTGAACAACATTATACAGAAAAACTTCCCAGAGGAACATGCTGAGAGGAAATCAGAGAATGATAGTTTGACAAAGCTCGGGGTTGATTTGGTACCTCTTTTTGTCATGGATGCTGTCCTCCCTTGTGAGAAAATGATGCTAAATATATTTGAACCTCGCTACAGACTTATGTCTCATCACAGATTATGGTGGTTTTATTCTCTTATTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72350.p1 GENE.R_Transcript_72350~~R_Transcript_72350.p1 ORF type:complete len:293 (+),score=46.31,zf-C3HC4_3|PF13920.2|4.2e-09,zf-C3HC4|PF00097.21|1.9e-08,zf-C3HC4_2|PF13923.2|2.7e-08,zf-RING_2|PF13639.2|1.5e-07,zf-RING_5|PF14634.2|4.1e-07,TPR_11|PF13414.2|3.9e-06,TPR_11|PF13414.2|5.6e+02,zf-C3HC4_4|PF15227.2|9e-07 R_Transcript_72350:233-1111(+)
MSGDENSLIGDFFDGIDDVEEFLCANEGGVSMSIDRFRQVFEFVQSGNQAFRASRFEEAINCYSTANVMKPGDPIILSNRCAAYIRLSQFLKSRPSTASESSPLYGLDPTTHAELERYKLARDVALSGLQLDPLSNHLQALLRILEKILTGSMGAKSRVKPERNDDFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDQSNKCPLCRTVLFITPRTCAISVTLNNIIQKNFPEEHAERKSENDSLTKLGVDLVPLFVMDAVLPCEKMMLNIFEPRYRLMSHHRLWWFYSLIA*

Click here to download the sequence:
Link to NCBI Protein BLAST