Transcript Information: R_Transcript_72426.p1


Annotated TAIR IDAT3G47520.1
Annotated Gene Namemalate dehydrogenase
Annotated Gene Symbol(s)MDH
Annotation TypeOrtholog
Chromosome Positionchr3:17513657-17514868 | Forward length=403
E-Value1.8E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.127942661249
Replicate 273.66412868947
Replicate 383.844179297724
Condition 2: 8 Hour
Replicate 153.455888294468
Replicate 260.724611650641
Replicate 378.117533898822
Condition 3: 24 Hour
Replicate 180.822545445002
Replicate 291.994344914673
Replicate 395.725744594503


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72426.p1 GENE.R_Transcript_72426~~R_Transcript_72426.p1 ORF type:complete len:415 (+),score=118.33,Ldh_1_N|PF00056.19|1.3e-48,Ldh_1_C|PF02866.14|9.3e+03,Ldh_1_C|PF02866.14|1.7e-46 R_Transcript_72426:2425-3669(+)
ATGGCCGCAACAGCAGCTGCAAATATATCCGTTTCATCATCTGCATCTTGCAATGCCAAGGTGTACACAGTTCCAAACACAAAGCCATCGAGTCTATGGTTAAAATCGACCCAGGATTTCAGGAATTTCAGTGGTCTTAAATCAGCTGCATGTGTGAGCTATGAATCTGAGACATCATTCCTGGGGAAAGATGGTCTTGTTTCCCTGCAAAATTCTTTCAGAAGAAGTGCTGTGAAGGAAAACAATGAATTTGTCACGTGTCTGCAGCCTAAGGCTTCTGCATCCTCAAAAGTGGCTATTCTTGGAGCAGCTGGAGGGATTGGTCAACCATTGGCACTTCTTGTTAAAATGTCACCACTAGTCTCTGACCTCCACCTTTATGATATAGCTAATGTCAAGGGAGTTGCTGCTGACCTAAGCCACTGCAATACTCCATCCCAGGTTTCACATTTTACTGGCCCTGAACAGTTAGCTGATGCTCTCAAGGGCATAGATGTTGTTGTCATCCCTGCTGGGGTTCCGAGAAAACCTGGAATGACAAGAGATGATCTCTTCAACATTAATGCTGGCATTGTGAAGACTTTGATTGAAGCTGTTGCTGATAACTGTCCAGATGCATTTATTCACATAATCAGCAATCCAGTCAATTCCACTGTACCCATTGCTGCTGAGGTGCTGAAACAAAAGGGTGTTTATAATCCCAAGAAACTCTTTGGTGTTACTACTCTGGATGTTGTTAGGGCAAACACATTTGTTGCCCAGAAGAAGAACCTGAAACTCATTGATGTAGATGTGCCAGTGATCGGGGGACATGCTGGTATAACCATTTTGCCACTGCTGTCTAAAACAAAACCTTCTGTGACTTTCACTGATGAGGAGGTGCAAGAGCTGACTGTGAGAATTCAGAATGCTGGAACAGAGGTCGTGGAAGCAAAAGCTGGGGCTGGTTCTGCAACACTTTCTATGGCATATGCTGCTGCCAGATTTGTCGAATCATCTCTGCGTGCTCTTGATGGGGACTCAGACGTGTACGAGTGTTCATTTGTGCAGTCAGAATTGACTGAGCTCCCTTTCTTTGCATCGAGAATTAAGCTGGGAAGGAAGGGTATCGAGGCCTTTGTGAATTCCGGCTTGCAAGGACTCACTGACTATGAATCCAAGGCTCTTGAAGCTCTTAAGCCCGAGCTGAAGGCCAGCATTGAGAAGGGTATTGCTTTTGCAAACAAGCAACCAGTTAGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72426.p1 GENE.R_Transcript_72426~~R_Transcript_72426.p1 ORF type:complete len:415 (+),score=118.33,Ldh_1_N|PF00056.19|1.3e-48,Ldh_1_C|PF02866.14|9.3e+03,Ldh_1_C|PF02866.14|1.7e-46 R_Transcript_72426:2425-3669(+)
MAATAAANISVSSSASCNAKVYTVPNTKPSSLWLKSTQDFRNFSGLKSAACVSYESETSFLGKDGLVSLQNSFRRSAVKENNEFVTCLQPKASASSKVAILGAAGGIGQPLALLVKMSPLVSDLHLYDIANVKGVAADLSHCNTPSQVSHFTGPEQLADALKGIDVVVIPAGVPRKPGMTRDDLFNINAGIVKTLIEAVADNCPDAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVTFTDEEVQELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDSDVYECSFVQSELTELPFFASRIKLGRKGIEAFVNSGLQGLTDYESKALEALKPELKASIEKGIAFANKQPVSA*

Click here to download the sequence:
Link to NCBI Protein BLAST