Transcript Information: R_Transcript_72490.p1


Annotated TAIR IDAT2G35500.1
Annotated Gene Nameshikimate kinase like 2
Annotated Gene Symbol(s)SKL2
Annotation TypeOrtholog
Chromosome Positionchr2:14914038-14915909 | Forward length=387
E-Value1.2E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.961093577617
Replicate 22.4982939735848
Replicate 34.929297963729
Condition 2: 8 Hour
Replicate 13.5334032961847
Replicate 24.8118353329133
Replicate 32.0679050073859
Condition 3: 24 Hour
Replicate 13.8941090740663
Replicate 22.6801327259436
Replicate 34.7100124009779


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72490.p1 GENE.R_Transcript_72490~~R_Transcript_72490.p1 ORF type:5prime_partial len:395 (+),score=71.59,SKI|PF01202.18|1.1e-06 R_Transcript_72490:3-1187(+)
GGGGGAATAATAAAAATGGCGACCTATCCGTTAGGCCATGGAATACCTCTGAGCTTTTGTCCGACAATTAACAATTTAACATTAACCTCTTTGTGTAGTTCTATTACACCCACTGTTCAACTCAAGCTTAAGAATCGCTCTACCAAAGCAGCCAAATCTTTGGACATATGTTCATTTTCTTTCCCTTGGTTGACAGCTAACACCAGTAGCATTCTCCGAAGAGTTGGCCCTGTTTCCTGCCACGATATTTCTGCTGCCCCCTCGAACACAACCCAGTATGAGTTTCATGATGGATCCTCCGAGGTGGAGCTAAGATTATTGCTCAGAGGTATAGAGGGTCCAAGTTCTAAAGAAATACATGTTGACGCTGATGAAAGCTCTTTAGTTGTAAGAATAAGTTGCCCTGGATCCATTATGACACTCATGGAGACTCAGCAACTCTATGACAGGATAAAGCCTGGTGAAACAATATGGTACTTAGATGATGATCAACTGGTGATTAACATGAAGAAGCAAGACTCAGAATTAAAATGGCCTGATATTGTTGAATCTTGGGAGTCACTTAATGTTGGTGTCGTGCAGCTTTTAAAAGGGACATCAATCTATTTAGTTGGCAATTCCACTGAAATCAATCATAAGGTTGCCCAGGAGCTCGCAGTTGGTCTAGGGTACACACCACTCAATACAAAAAGCTTGCTGGAGGCGTTTGCAAAGCGAAGTGTAGACTCTTGGGTGGCTGCAGAAGGACCAAACTCTGTGGCAGAAGCTGAGCAAGCAGTTTTAGAGAGCCTAAGTAGCCATGTACGAGCCGTTGTTGCAACATTAGGCGGAAACCATGGTGCTGCTGTCCGGGAAGACAAGTGGCGGCATCTTTATTCAGGATTTACTGTCTGGTTGTCAGAATCTGAGGCAACAGATGAAGATTCTGCTAAAGAAGAGGCTCGAAAGCAAGTCTTTTCCGGCAGTGAGGCGTATTCAAAAGCAGATGTCGTCGTGAAGCTTGGTGGTTGGAATGCTGCTTATGCCAAAACTGTGGCCGAAGCTTCCTTGAGTGCCTTGAAGCAGCTAATCCTCTCTGATAAAAAGCTCCCAGGTAAGAAGAGTCTATACATAAGGCTAGGCTGTCGTGGAGATTGGCCAAACATCAAGCCTCCAGGTTGGGACCCATCTACTGCTGATGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72490.p1 GENE.R_Transcript_72490~~R_Transcript_72490.p1 ORF type:5prime_partial len:395 (+),score=71.59,SKI|PF01202.18|1.1e-06 R_Transcript_72490:3-1187(+)
GGIIKMATYPLGHGIPLSFCPTINNLTLTSLCSSITPTVQLKLKNRSTKAAKSLDICSFSFPWLTANTSSILRRVGPVSCHDISAAPSNTTQYEFHDGSSEVELRLLLRGIEGPSSKEIHVDADESSLVVRISCPGSIMTLMETQQLYDRIKPGETIWYLDDDQLVINMKKQDSELKWPDIVESWESLNVGVVQLLKGTSIYLVGNSTEINHKVAQELAVGLGYTPLNTKSLLEAFAKRSVDSWVAAEGPNSVAEAEQAVLESLSSHVRAVVATLGGNHGAAVREDKWRHLYSGFTVWLSESEATDEDSAKEEARKQVFSGSEAYSKADVVVKLGGWNAAYAKTVAEASLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSTADG*

Click here to download the sequence:
Link to NCBI Protein BLAST