Transcript Information: R_Transcript_72493.p1


Annotated TAIR IDAT2G35500.1
Annotated Gene Nameshikimate kinase like 2
Annotated Gene Symbol(s)SKL2
Annotation TypeOrtholog
Chromosome Positionchr2:14914038-14915909 | Forward length=387
E-Value1.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0389149427303
Replicate 26.9465372024071
Replicate 35.5842295632411
Condition 2: 8 Hour
Replicate 15.1164493919617
Replicate 24.8949194080207
Replicate 35.5538510107154
Condition 3: 24 Hour
Replicate 15.4824614275114
Replicate 24.389106246881
Replicate 33.6479507811496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72493.p1 GENE.R_Transcript_72493~~R_Transcript_72493.p1 ORF type:5prime_partial len:402 (+),score=62.95,SKI|PF01202.18|1.2e-06 R_Transcript_72493:3-1208(+)
GGGGGAATAATAAAAATGGCGACCTATCCGTTAGGCCATGGAATACCTCTGAGCTTTTGTCCGACAATTAACAATTTAACATTAACCTCTTTGTGTAGTTCTATTACACCCACTGTTCAACTCAAGCTTAAGAATCGCTCTACCAAAGCAGCCAAATCTTTGGACATATGTTCATTTTCTTTCCCTTGGTTGACAGCTAACACCAGTAGCATTCTCCGAAGAGTTGGCCCTGTTTCCTGCCACGATATTTCTGCTGCCCCCTCGAACACAACCCAGTATGAGTTTCATGATGGATCCTCCGAGGTGGAGCTAAGATTATTGCTCAGAGGTATAGAGGGTCCAAGTTCTAAAGAAATACATGTTGACGCTGATGAAAGCTCTTTAGTTGTAAGAATAAGTTGCCCTGGATCCATTATGACACTCATGGAGACTCAGCAACTCTATGACAGGATAAAGCCTGGTGAAACAATATGGTACTTAGATGATGATCAACTGGTGATTAACATGAAGAAGCAAGACTCAGAATTAAAATGGCCTGATATTGTTGAATCTTGGGAGTCACTTAATGTTGGTGTCGTGCAGCTTTTAAAAGGGACATCAATCTATTTAGTTGGCAATTCCACTGAAATCAATCATAAGGTTGCCCAGGAGCTCGCAGTTGGTCTAGGGTACACACCACTCAATACAAAAAGCTTGCTGGAGGCGTTTGCAAAGCGAAGTGTAGACTCTTGGGTGGCTGCAGAAGGACCAAACTCTGTGGCAGAAGCTGAGCAAGCAGTTTTAGAGAGCCTAAGTAGCCATGTACGAGCCGTTGTTGCAACATTAGGCGGAAACCATGGTGCTGCTGTCCGGGAAGACAAGTGGCGGCATCTTTATTCAGGATTTACTGTCTGGTTGTCAGAATCTGAGGCAACAGATGAAGATTCTGCTAAAGAAGAGGCTCGAAAGCAAGTCTTTTCCGGCAGTGAGGCGTATTCAAAAGCAGATGTCGTCGTGAAGCTTGGTGGTTGGAATGCTGCTTATGCCAAAACTGTGGCCGAAGCTTCCTTGAGTGCCTTGAAGCAGCTAATCCTCTCTGATAAAAAGCTCCCAGGTCATTGCATGCTGCCAAATCCAATTTCCGTGTGTCATCTTATGCATATACTATATGATTTTTTCTTGAAATTTGAATTTTATTTATATTTTGGATGTGCGGGTACCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72493.p1 GENE.R_Transcript_72493~~R_Transcript_72493.p1 ORF type:5prime_partial len:402 (+),score=62.95,SKI|PF01202.18|1.2e-06 R_Transcript_72493:3-1208(+)
GGIIKMATYPLGHGIPLSFCPTINNLTLTSLCSSITPTVQLKLKNRSTKAAKSLDICSFSFPWLTANTSSILRRVGPVSCHDISAAPSNTTQYEFHDGSSEVELRLLLRGIEGPSSKEIHVDADESSLVVRISCPGSIMTLMETQQLYDRIKPGETIWYLDDDQLVINMKKQDSELKWPDIVESWESLNVGVVQLLKGTSIYLVGNSTEINHKVAQELAVGLGYTPLNTKSLLEAFAKRSVDSWVAAEGPNSVAEAEQAVLESLSSHVRAVVATLGGNHGAAVREDKWRHLYSGFTVWLSESEATDEDSAKEEARKQVFSGSEAYSKADVVVKLGGWNAAYAKTVAEASLSALKQLILSDKKLPGHCMLPNPISVCHLMHILYDFFLKFEFYLYFGCAGTI*

Click here to download the sequence:
Link to NCBI Protein BLAST