Transcript Information: R_Transcript_7257.p1


Annotated TAIR IDAT2G40430.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16879527-16882365 | Reverse length=449
E-Value4.5E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.874439837296
Replicate 233.02686034982
Replicate 335.882231659332
Condition 2: 8 Hour
Replicate 133.76808826058
Replicate 232.786216730104
Replicate 340.653280430845
Condition 3: 24 Hour
Replicate 146.415784547515
Replicate 242.476794900371
Replicate 348.114801806273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7257.p1 GENE.R_Transcript_7257~~R_Transcript_7257.p1 ORF type:5prime_partial len:459 (+),score=109.68,Nop53|PF07767.7|3.2e+03,Nop53|PF07767.7|5.9e-57 R_Transcript_7257:3-1379(+)
CAAATGTTTTTCATTTTATTTTTCAAACCATTTTTGTATACCAACCCAATATTCTCACAAAATGAGTCCAAAACCGCTGGTAGCATAAAAACGGGCCGCAAAAAAGGAATACAAAAAATAAAAAAGAAGAGAGAAAAAAACAAAAAAAGAGGAGGAAAAAAAAAACAAACAAAACGGGCACAAATTGAGAACCCTGGACGGGACTCGGGAGACGGAGTAAACAGAGACATTCATCTCCTTGTGATTCTGCTTGAGTCGGCGCCTCCATACTTCGACAAGAGGAGAAAGATGGGGAAGAAGAGAGCGAAGAAGGTGAAGAAAGCATGGAGAAATATTAGCACTCAAGATATCGACGACTTCAACGCTAAAGTCACTCGTGACGCTCATTCTGGTGGTTCTCTTGCCTCTGCCTCCAACGATTCCCTCTTTGTCCTTGACAAATCCACTGATGTCCCCGTAAAGCGAAAGATTGAGAAGAAAAGGGAGAAAGTGCTTCGCGTTGAAAGTATTCTTCAGAGAAACCCCTTCGTTAAGCCAGTTCCTTCTTCCACCCTTAAGAAGTCCAACAAAAAGGCTAAACAAAGTGCTGAGCTAACTCATCCTCTCAATGATTCTAAAGATAAGGAGTTTAAAGGATCGGAACCTGGCCTCTTTGATATCTGGAGTGATGAAGGCAAAGATAACATCAAAGCCAAGAAGAAAGCTAAACCTTCGGTTATTCCAGCAGTTGAAGTTGAGCCTCCTGGATGCTCTTTTAATCCAGAAAATGAGAGTCACAAGGACTCTTTGGCCCAAGCTGTTGCTGAAGAGATGAAAAAAGTCTATAAAAAAGAGTTGGAGCCTCAACCAATTCCTTTAATTGTTCCTGGAGAAGTGATAACTGAAGAAGATAGATATTTCCTTGAAGTAGACAATGAAGATGAGGATGAGATGGATGATGAAAATCAAACCGAGTATGCAGATCCTGAAGCTGAGAAAAGGACATCCAAAGAAAAGCGGGTGACAAGAGTTGAGCATAATAGAAGAATCAGGCAAAAGGAGCAACTGAAAGCAGAAGCGGAAGCAAAAAAGGTTGAGAATCTTTCGAAGGAAATTGAAAGCATACCGGAAATACTTCGGGAAATAGCCCAAGAAGAGGAGGAAAAGCAGAAAAAACATATCCGTCGCATGATAGCAAAGGAAGAAAGACTCAAATCAGGCCCTCCTCGTTTGGGAAAGCGGAAATTTGAGCCTGCTCCTGTTCAAGTCCTCTTAACTGAAGAAATTACTGGTTCCCTCCTCAAGCTGAAGGCTTGTTGCACGCTAGCAAGGGACCGATTTAAGAGCCTCGAGAAGAGAGGATTGATTGTCCCATCTGCTAAAGGCAGCAAGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7257.p1 GENE.R_Transcript_7257~~R_Transcript_7257.p1 ORF type:5prime_partial len:459 (+),score=109.68,Nop53|PF07767.7|3.2e+03,Nop53|PF07767.7|5.9e-57 R_Transcript_7257:3-1379(+)
QMFFILFFKPFLYTNPIFSQNESKTAGSIKTGRKKGIQKIKKKREKNKKRGGKKKQTKRAQIENPGRDSGDGVNRDIHLLVILLESAPPYFDKRRKMGKKRAKKVKKAWRNISTQDIDDFNAKVTRDAHSGGSLASASNDSLFVLDKSTDVPVKRKIEKKREKVLRVESILQRNPFVKPVPSSTLKKSNKKAKQSAELTHPLNDSKDKEFKGSEPGLFDIWSDEGKDNIKAKKKAKPSVIPAVEVEPPGCSFNPENESHKDSLAQAVAEEMKKVYKKELEPQPIPLIVPGEVITEEDRYFLEVDNEDEDEMDDENQTEYADPEAEKRTSKEKRVTRVEHNRRIRQKEQLKAEAEAKKVENLSKEIESIPEILREIAQEEEEKQKKHIRRMIAKEERLKSGPPRLGKRKFEPAPVQVLLTEEITGSLLKLKACCTLARDRFKSLEKRGLIVPSAKGSKK*

Click here to download the sequence:
Link to NCBI Protein BLAST