Transcript Information: R_Transcript_72592.p1


Annotated TAIR IDAT1G53470.1
Annotated Gene Namemechanosensitive channel of small conductance-like 4
Annotated Gene Symbol(s)MSL4
Annotation TypeHomolog
Chromosome Positionchr1:19958587-19961578 | Forward length=881
E-Value7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2325706561667
Replicate 24.1196754440005
Replicate 34.0093175056811
Condition 2: 8 Hour
Replicate 12.8116433551463
Replicate 22.6174945299047
Replicate 33.2175095748512
Condition 3: 24 Hour
Replicate 15.2211735501133
Replicate 25.015911720934
Replicate 35.9538460909732


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72592.p1 GENE.R_Transcript_72592~~R_Transcript_72592.p1 ORF type:complete len:897 (+),score=133.17,MS_channel|PF00924.14|3.2e-11 R_Transcript_72592:299-2989(+)
ATGGTTCAAGAAACGTGGACAAGCTATTCTGGTCCCGACCCCCAGGAAGACTCCATTGCTGCTCCTCTTATCAACCGAGAAACACACCACCAGGAGGTAAATGAGGACCTAGAACAAGGAGTTGGACACCACCCTTACATGGAGGATCCAAACGGAAATGATATGAGAAGCAATCATTCTGTTATACCATCAATATTGGAAAAAATTTGGATTCTTGTAATTGCCATTCTTGGGATTGTTCTGCTTCCATGGATGCTGACAGCTATTGTTGTCATTGTAGTTCCTTTCTTAATGTTGGGAAACACAATTGTAAACATCATAGACTCGATGAAGGGTGAAGCTGGAAAGAGGAACTTAGTGAGCCCCATAAAAGATCGTGCTGCAGCTTCAATCTTACTCCTTAATATCATCACCTTGTCAATATGGTTTGGAATCGTCCAATCCGTAGAAAATTGGAAACATCATACTCTTCTTGGAGTGGAAATACCAAAATGGCTTATAGTTTTCATCATCCTTCTTGTGTATTGCTTCCTTCGAAGAGGTATATTGATGATGGTAACTCCAAACAGGGCTCAGAAATTGCACGGCCTAGTTGAGGTCATACAGTGTGCTCTTTTCTTCCCATCCTTAATATTGATTATTAAGGTAGTCCCAGGTTGGAAAGATCATACGATTCTTGGTCTTCAAACATGGAAATGGATTTTTGTGTTAAATCTGGTAATTGTTGGTCAGAATGCCATAAGCATTTTGAGTCATGGGATATTGTATGTCTCTAAATTATACTATTGTAGGAGGCAAGTCGAAAAATGCAAAGGCAAAAGCTGTGGATTTTATTATGTCAAAGGTCTAAAAAGAAGCATGGTGTTTGTAGCAGTTTCACTTACACATCTTCTGTTTTGGTGTTTGTTCTTTAGCCCCAACATTGTTAAGAATACAGACTCTGAATCTGATGATCCAGTGGGAAAAAGGGTGTCGAGTTTCGGGACTTGGACTTTTGTATGTGAGCTAATATGTGGAGTCCTTTGGGGAATGAAGACGTTTACATTACTCAAGTGGAAGGCTTACACACTTTATAGTCGCCCAAGTGATGAAGTTGTCAGAAAATTGACAAACTGGTATTGTCTCTCTTTAATTGAACTCATCCAGTTGAATAAGGGCCTCAAGAAAAAGTCATTATTAACATCAAAATCTTCTAAGAAGAAACAAAATGATTCTGAATCGCTAAGTAAGAAGCTCTTCAATGTTGTGCTCCAATTTTTGCTCAACCATGTTTTTGAAGACATTCAACAAAAGAATGAAGAGACGGAAAGGAATAGGAAGCAACATACATGGGATGCTACCATGAAAAAACTCAATGATATTTTTGATCAAGAGAAAAAACCCACCGATCTTGAAAGCAGTCATCAAAAGAATAGCATTCATAAGAATGATCAGAAGAAGGAATTGGACAAGATGTATGAAGGTAGAATCACAATACATGCAATGGAGAATATTGCATGGGCCTTCAAACCTGGTGATCTATCACTCCCAGATGAAAAAAGCATTTCAGAATTTCTGGAGAAATGGAAGTTGGAGGAACACAGTTTAATGAACGACAATGAAATGCTGAAGCAAATGCTGGATAATATATGTTCCAATGAGTTGGAACCACATGCTTTGGAATTCTTGCACACACAGCTTCAAAAGACAGCTGAAAAAACACAAGAAGGTGTACTAACTGCTACAAATTTGCGCTCATGGATGGAAAGTGCTAAGCAAAGTTGTTTGCAATCACAATACCTGATAGGAGCTGCTCGAGAGGTTGTGAGTTTCTTTGACAACGTTGCAACGAGTTTCATATTGGCGCTAGTCATCATTATTTGGCTGCTTCTCACAGAAGTTTTACCAACAAAAGTATTGGTTGCTATTTCATCCCCATTTTTGGCTGCAACCTTCATATTTGGAGACACTTTGACAACTATGTTTCAAGGCATTGTGTTTGCTTACTTGACACATCCATTTGCTATAGGCGATTTGTGTATCATAGACAAGACTCAGATGGAGGTAAAGAGTATTGGCATTTGGAGAACAACATTTACAATATTGGGCACCGAAGAAGAAGTCCTATACCCAAATTCCGCTCTAGCAAATCAAGCTATTATCAATCTTGCGACCGAGAAGGACCGAGTTAAACAGCAAGATTCTGTGGAGTTCAGTTTAGACAATGCCACAAAGAAGATAACTATAGAAAAGATAACAACAGATATTGGAAGAATTTTATCGAACATCAAAAATCCTCCTGATACGGTGGGAAACATGAAACAAAATGCAGCAAGTGGATCATCAAATCTGCAATCACATGGCTCAATCGGGAAGGACGATGATGATGATAACAATAGTACAAATACTAATGATGATAAAAATAAGGAAATCGCTGAAGATGATGATGATGATGATAAGGAAAATCGACCTATTATAAGTGGTACTAAATTTAAAGCTGAAAGGAGCGGTAATCATGGTAATAACGAGGTGATGGTTGTGAAGCACATTGAAGATGATAATATCAAAATTACAGCACGCTTCATGCATGACCCAAGCATTCTTGATATGACTCATACACAAGCTTTTCATCAAAAACTCATCAAGAGATCAACGGTTCTAGATCAAATTGCTGCTTCTTTATCCTTTTATCTTTCACATAGCCGCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72592.p1 GENE.R_Transcript_72592~~R_Transcript_72592.p1 ORF type:complete len:897 (+),score=133.17,MS_channel|PF00924.14|3.2e-11 R_Transcript_72592:299-2989(+)
MVQETWTSYSGPDPQEDSIAAPLINRETHHQEVNEDLEQGVGHHPYMEDPNGNDMRSNHSVIPSILEKIWILVIAILGIVLLPWMLTAIVVIVVPFLMLGNTIVNIIDSMKGEAGKRNLVSPIKDRAAASILLLNIITLSIWFGIVQSVENWKHHTLLGVEIPKWLIVFIILLVYCFLRRGILMMVTPNRAQKLHGLVEVIQCALFFPSLILIIKVVPGWKDHTILGLQTWKWIFVLNLVIVGQNAISILSHGILYVSKLYYCRRQVEKCKGKSCGFYYVKGLKRSMVFVAVSLTHLLFWCLFFSPNIVKNTDSESDDPVGKRVSSFGTWTFVCELICGVLWGMKTFTLLKWKAYTLYSRPSDEVVRKLTNWYCLSLIELIQLNKGLKKKSLLTSKSSKKKQNDSESLSKKLFNVVLQFLLNHVFEDIQQKNEETERNRKQHTWDATMKKLNDIFDQEKKPTDLESSHQKNSIHKNDQKKELDKMYEGRITIHAMENIAWAFKPGDLSLPDEKSISEFLEKWKLEEHSLMNDNEMLKQMLDNICSNELEPHALEFLHTQLQKTAEKTQEGVLTATNLRSWMESAKQSCLQSQYLIGAAREVVSFFDNVATSFILALVIIIWLLLTEVLPTKVLVAISSPFLAATFIFGDTLTTMFQGIVFAYLTHPFAIGDLCIIDKTQMEVKSIGIWRTTFTILGTEEEVLYPNSALANQAIINLATEKDRVKQQDSVEFSLDNATKKITIEKITTDIGRILSNIKNPPDTVGNMKQNAASGSSNLQSHGSIGKDDDDDNNSTNTNDDKNKEIAEDDDDDDKENRPIISGTKFKAERSGNHGNNEVMVVKHIEDDNIKITARFMHDPSILDMTHTQAFHQKLIKRSTVLDQIAASLSFYLSHSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST