Transcript Information: R_Transcript_72631.p1


Annotated TAIR IDAT5G41370.1
Annotated Gene NameHomolog of xeroderma pigmentosum complementation group B 1
Annotated Gene Symbol(s)XPB1, ATXPB1
Annotation TypeOrtholog
Chromosome Positionchr5:16551337-16555792 | Forward length=767
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.716610895154
Replicate 26.1460195869401
Replicate 39.5643287734307
Condition 2: 8 Hour
Replicate 19.2049388286078
Replicate 210.399637468486
Replicate 316.85699351819
Condition 3: 24 Hour
Replicate 114.395534398352
Replicate 211.994390421919
Replicate 314.049759917889


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72631.p1 GENE.R_Transcript_72631~~R_Transcript_72631.p1 ORF type:3prime_partial len:673 (+),score=136.19,ERCC3_RAD25_C|PF16203.1|1.4e-107,Helicase_C_3|PF13625.2|5.7e-40,Helicase_C_3|PF13625.2|3.6e+03,ResIII|PF04851.11|9.9e-15,Helicase_C|PF00271.27|7.8e+03,Helicase_C|PF00271.27|3.2e-11 R_Transcript_72631:221-2236(+)
ATGGGATTTCACGGTGACAGCAAGGGCAGACCAAGCAAGAAACACAAGTCATCCAGGGATGATCGTCAGAAGAATGTAGACGATGATGAGTCCTATTTTACCCCTGAAGATTTCGACGATGACAGTAATCGTGAAGGTGAAGCTAAAAAGAGAGATTTCACAAAGTTGGAACTCAAGCCTGATCACGCTAACCGCCCCCTATGGGCTTGTGCTGATGGACGCATTTTTCTTGAAACTTTCTCCCCTTTGTACAAACAAGCTTATGATTTCCTCATTGCCATTGCGGAGCCCGTTTGTAGGCCTGAGTCGATGCACGAGTACAACTTGACCCCACACTCGTTGTATGCTGCTGTGTCTGTTGGTCTCGAAACAGAAACAATTGTAACTGTGTTGAATAAGTTGTCTAAGACGAAGCTCCCCAAAGAAATGGTTGACTTTATTTATGCTTCCACTGCAAATTATGGAAAAGTTAAGCTCGTGCTTAAGAAGAATCGGTACTTCATTGAATCCCCGTTTCCGGAGGTGTTGAAAAAGTTGCTCAAAGATGAGGTTATTGGCAAGGCAAGGATTTCTGCTGAGGCTTCCCATGGAATGGATGGGTTTACGGTCAGTAAAGCATTGAGTGATATGGGGGGTGGTCATGGGGATCTCCTCAATGAAGCTGAATTGGCAGCTGCTGCAGAAGAAAAGGAGACACACTCATTTGAAATTGACCCCTTACAGGTTGAAAATGTCAAGCAACGGTGCTTGCCAAATGCTCTAAATTATCCTATGCTGGAGGAGTATGATTTCAGGAATGACACAGTGAACCCTGACCTTGATATGGAGTTGAAGCCTCATGCACAACCACGTCCATACCAGGAGAAGAGTCTTAGTAAAATGTTTGGGAACGGTAGAGCAAGATCTGGTATCATTGTGTTACCATGTGGTGCAGGAAAGTCTCTAGTAGGTGTATCAGCTGCATGCCGTATAAAGAAGAGTTGCCTTTGTTTGGCCACAAATGCTGTGTCAGTTGATCAATGGGCATTTCAGTTTAAGCTTTGGTCTACTATAAAGGATGAAAATATCTGTCGTTTCACTTCTGATAGCAAAGAGAGATTTCGTGGCAACGCTGGAGTAGTTGTGACAACATATAATATGGTTGCTTTTGGCGGTAAGCGTTCTGAAGAATCTGAGAAGATCATTGAAGAAATTAGAAATAGAGAATGGGGTTTACTCTTGATGGACGAGGTGCATGTTGTCCCTGCTCATATGTTTCGCAAAGTCATCAGTATTACTAAATCACACTGTAAACTTGGGCTGACTGCAACACTTGTGAGAGAGGATGAGAGGATCACAGATCTGAACTTCCTTATCGGTCCTAAATTGTATGAGGCCAACTGGTTGGATTTGGTAAAGGGTGGCTTTATTGCCAATGTACAGTGTGCTGAAGTTTGGTGTCCAATGACAAAAGAGTTCTTTGCTGAATACCTGAAGAAAGAAAATTCCAAGAAAAAGCAGGCCTTATATGTGATGAACCCTAACAAGTTCAGAGCCTGTGAGTTCCTAATTAGATTTCACGAGAGGGAGCGTGGTGATAAAATTATTGTCTTTGCCGATAATCTTTTTGCACTCACCGAGTATGCTATGAAGCTTCGGAAGCCTATGATTTATGGTGCCACCAGCCATGTGGAGAGAACTAAAATATTGGAGGCCTTCAAAACTGGAAAGGATGTTAACACTATATTCCTGTCAAAGGTTGGTGATAACTCAATAGATATACCCGAAGCAAATGTAATAATCCAAATTTCATCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGACTTGGTCGTATTCTTAGGGCAAAGGGTCGAATTGAAGATAGGATGGCTGGGGGAAAAGAGGAGTATAATGCCTTCTTTTATTCCCTTGTATCTACAGATACACAGGAGATGTATTACTCAACTAAAAGGCAACAATTCTTGATTGACCAAGGTTACAGCTTTAAGGTCATAACGAGTTTACCACCTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72631.p1 GENE.R_Transcript_72631~~R_Transcript_72631.p1 ORF type:3prime_partial len:673 (+),score=136.19,ERCC3_RAD25_C|PF16203.1|1.4e-107,Helicase_C_3|PF13625.2|5.7e-40,Helicase_C_3|PF13625.2|3.6e+03,ResIII|PF04851.11|9.9e-15,Helicase_C|PF00271.27|7.8e+03,Helicase_C|PF00271.27|3.2e-11 R_Transcript_72631:221-2236(+)
MGFHGDSKGRPSKKHKSSRDDRQKNVDDDESYFTPEDFDDDSNREGEAKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVTVLNKLSKTKLPKEMVDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKKLLKDEVIGKARISAEASHGMDGFTVSKALSDMGGGHGDLLNEAELAAAAEEKETHSFEIDPLQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTGKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRIEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPP

Click here to download the sequence:
Link to NCBI Protein BLAST