Transcript Information: R_Transcript_72724.p1


Annotated TAIR IDAT5G58100.1
Annotated Gene Nameunknown protein; INVOLVED IN: pollen exine formation; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23507828-23514863 | Forward length=945
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.528612100576
Replicate 218.311238937484
Replicate 322.210411191238
Condition 2: 8 Hour
Replicate 118.864895949922
Replicate 219.032532552456
Replicate 319.902080407678
Condition 3: 24 Hour
Replicate 122.115539666939
Replicate 221.616003210367
Replicate 319.54750984616


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72724.p1 GENE.R_Transcript_72724~~R_Transcript_72724.p1 ORF type:complete len:954 (+),score=175.49 R_Transcript_72724:144-3005(+)
ATGGCGTCCAATGGCGGATCCTTCACGCCACTTCCACCACATCTACACTTCCGCACGGTCTCCCGTCTCTCCTTCCTCCTCTTCTTCACTCTTCTACTGGCTTCTGTCCCCGAGTCACTTGGATCTCCAGCACATCGTAAAAGTGGGACGTCTTCTGTGTTTTCTTTGTTCAATCTCAAAGAAAAGAGCAGGTTCTGGACTGAGTCTATCATACATGGTGATTTTGATGATTTGGGATCTTCAACCCCTGGAAAGAGTGGGGCTCTCAACTACTCCAAGGCAGGTAATATTGCCAATTATTTGAAGCTCCAGGAAGTTGATTCTATGTATCTTCCCGTGCCTTTGAACTTTATTTTTATTGGATTTGAAGGCAAAGGAAATGAAGGTTTTAAGCTGCAAGCTGAAGAAATGGAGCGCTGGTTCACAAAAATTGATCATATCTTTGAGCATACACGGGTTCCACAAATTGAAGAAGTGTTGAGCCCATTTTACAAGATCAATATTGATAAAGGGAATCACCATTTTCCAAGCTTAAGCCATGTAAACTACAATTTTTCTGTTCATGCCATACAAATGAACGAAAAGGTGACTTCTGTTTTTGAACGTGCCATTGCTGTCTTATCTCGGAAGGATGACGTCTCAGGGTCAGGGGATGGTAAAGAGGCTTTCTGGCAAGTGGACCTGGATATGATGGAAGTTCTTTTTGATAGTCTTGTTGAGTATTTACAAGTTGGAAATGCATACAACATTTTCATTTTGAACCCAAAGCATGATCTTAACAGAACTAGATACGGTTATAGGAGAGGATTGTCTGATTCAGAGATAGACTTTCTAAAACAGAATAAGAGCTTGCAGGCTAAAATACGTGAATCAGGAAGTGTTTCAGAGATTACTCTTGCAATTGAAAAGATACAAAGGCCTCTATATGGAAAACACCCAATGGTTAAGTTTGCTTGGACAACTACTGAAGAAACTGATACGATAGAATGGTCTAATACATGTTTAGAAGCTCTAAATAATATTGAGAAGTTATATGAAGGAAAGGACACAGATTACATCATTCAGAGCAAAGCTCTACAGGTGTTGAATGGGAGGAGTGGAAATCTAAAAATTACTCTGGGAAAGGAGCTGAAATCTGGGGACCTCAGTGGCCTTCATGCTGAATGTCTGACAGATACTTGGATAGGAAAAGACAGGTGGGCATTTATTGATCTAAGTGCCGGCCCTTTTACATGGGGTCCTGCTGTTGGAGGACAGGGTGTTCGTACAGACCAATGTTTGCCAAATGTGACGAAAACAATTGGTGCTGTTGCAGAGATTTCAGAAGAGGAAGCAGAAGATCGCTTACAGGATGCAATCCAGGAAAGATTTGCTGTTTTTGGGGACAGAGAACATGAGGCTATTGACATCCTGCTTGCTGAAGTTGATATTTATGAGCTTTTTGCTTTTAAGCATTGCAAAGGGAGAAGAGTTAAGCTTGCCCTTTGTGAAGAACTTGATCAAAGAATGCACGAACTGAGGAATGAGCTCCAGGGCTTGGAAGGGGATGATTATGATGAAAATCATAGGAGAAAAGCATTAGACGCGTTAAAGCGAATGGAGAGCTGGAATCTATTCAGTGATACCGCTGAGGAGTTCCAAAGCTACACTGTTGCTCGTGATACCTTTCTGGCTCATTTAGGTTCTGTCTTGTGGGGATCTATGAGGCACATTATAGCGCCGTCCGTGGCTGATGGAGCATTTCATTTCTATGAGCAGATATCTTATCAGTTATTTTTCATCACACAGGATAAAGTCAGGAGTGTCAAGCATTTGCCTGTAGATCTGAGGGCTTTAATGGATGGGCTATCTTCTTTGTTGCTTCCTTCTCAGAAAGTCATGTTTAGCCAGCACATGTTGCCACTTTCTGAAGATCCTGCTTTAGCAATGGCTTTCTCAGTGGCGCGTCGAGCAGCAGCTGTGCCGATGTTGTTTGTTAATGGAACATATAGAAAAACTGTCTCGAACTATCTCGATTCCTCCATTCTCCAACACCAACTACGGAGGCTCAATGATCATGGCACACTTAAAGGAACACATGCCAATAGCAGATCCACACTTGAGGTTCCAATTTTCTGGTTTATCCATGCTGATCCATTGCTGGTTGACAAGCATTACCAAGCAAAAGCACTTTCGGATATGATCGTTGTTGTTCAGTCAGAATCCTCATCCTGGGAAAGTCATTTCCAGTGTAATGGGCAGTCAATACTTTGGGATTTAAGGAGGCCCATAAAAGCTGCTATTGCTGCCGCTTCTGAACATTTAGCTGGTTTGCTTCCTCTACATCTTGTCTACAGCCATGCTCATGAAACTGCTATTGAGGATTGGATATGGTCAGTTGGCTGCAACCCTTTTTCAATCACCTCTCAAGGTTGGCGTATCTCTCAGTTTCACTTGGACACAATTGCCCGCAACTATATTATCACTAGTCTGGAGGAATCTATCCAGCTAGTAAACTCAGCCATTCACCGTCTTGTCCTGGAGCAGACAACTCAAAAATCATTTAAGCTTTTTCAGTCCCAGGAGCGTGAGCTTGTGAACAAGTATAATCTTGTTATCGGCCTGTGGAGAAGAATAGCTACTGTTACTGGGGAGTTGCGTTATGTTGATGCCTTAAGGCTTCTGTACACCTTGGATGACGGATCCAGACGCTTTGTGGAGCAAGTGAACTCTACAATAACTCTGCTTCATCCAATACACTGCACAAAAGACAGGAAGGTGGAGGTGGTATTTGACATGACAACGATTCCTGCTTTCTTGGTTGTCTTGTTGATCCTATGGATAGTTTTAAAACCGAAGCGAGCAAAGCCTAAGATTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72724.p1 GENE.R_Transcript_72724~~R_Transcript_72724.p1 ORF type:complete len:954 (+),score=175.49 R_Transcript_72724:144-3005(+)
MASNGGSFTPLPPHLHFRTVSRLSFLLFFTLLLASVPESLGSPAHRKSGTSSVFSLFNLKEKSRFWTESIIHGDFDDLGSSTPGKSGALNYSKAGNIANYLKLQEVDSMYLPVPLNFIFIGFEGKGNEGFKLQAEEMERWFTKIDHIFEHTRVPQIEEVLSPFYKINIDKGNHHFPSLSHVNYNFSVHAIQMNEKVTSVFERAIAVLSRKDDVSGSGDGKEAFWQVDLDMMEVLFDSLVEYLQVGNAYNIFILNPKHDLNRTRYGYRRGLSDSEIDFLKQNKSLQAKIRESGSVSEITLAIEKIQRPLYGKHPMVKFAWTTTEETDTIEWSNTCLEALNNIEKLYEGKDTDYIIQSKALQVLNGRSGNLKITLGKELKSGDLSGLHAECLTDTWIGKDRWAFIDLSAGPFTWGPAVGGQGVRTDQCLPNVTKTIGAVAEISEEEAEDRLQDAIQERFAVFGDREHEAIDILLAEVDIYELFAFKHCKGRRVKLALCEELDQRMHELRNELQGLEGDDYDENHRRKALDALKRMESWNLFSDTAEEFQSYTVARDTFLAHLGSVLWGSMRHIIAPSVADGAFHFYEQISYQLFFITQDKVRSVKHLPVDLRALMDGLSSLLLPSQKVMFSQHMLPLSEDPALAMAFSVARRAAAVPMLFVNGTYRKTVSNYLDSSILQHQLRRLNDHGTLKGTHANSRSTLEVPIFWFIHADPLLVDKHYQAKALSDMIVVVQSESSSWESHFQCNGQSILWDLRRPIKAAIAAASEHLAGLLPLHLVYSHAHETAIEDWIWSVGCNPFSITSQGWRISQFHLDTIARNYIITSLEESIQLVNSAIHRLVLEQTTQKSFKLFQSQERELVNKYNLVIGLWRRIATVTGELRYVDALRLLYTLDDGSRRFVEQVNSTITLLHPIHCTKDRKVEVVFDMTTIPAFLVVLLILWIVLKPKRAKPKIN*

Click here to download the sequence:
Link to NCBI Protein BLAST