Transcript Information: R_Transcript_72887.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value8E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.46017935474
Replicate 227.812807669506
Replicate 330.78092864483
Condition 2: 8 Hour
Replicate 130.097208997656
Replicate 237.268136401976
Replicate 338.635198994088
Condition 3: 24 Hour
Replicate 131.28798380859
Replicate 227.530783233203
Replicate 334.199538573277


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72887.p1 GENE.R_Transcript_72887~~R_Transcript_72887.p1 ORF type:complete len:576 (+),score=164.86,Frigida|PF07899.7|9e-90 R_Transcript_72887:287-2014(+)
ATGGCTGATACAGAAAAAATTGTTCACATCAATTTGACATCGTCTACTGAGTTGACTAAATCTCTAATAGAACAGCTAGGGAAGGCTTTTGTTGAGCTGGAAGCTTGCGAGGTTGCTTACTCGAGCGATGTTAAGCTACATGATGTTGAAGAACATTTCCATCACATGGGGGCAATGATGAAGAAGAAGCTTGAAGAACTTGAAGCCAAGGAGAAGATATTCGCTGAAAGAGAATCTCATAATCGCATGCTAATTTCTCAGAGAGAGGCAGCAGTTATCACTAAGGAACAAGATCTGCTAGATAAGGTGCAGGAGCTAAAAGATGCTGCTGTGGCTACCATTGCGGAAGCTAGGGGAAGTCATAAACCAGAATCCTTGGAGCCAGCCAGCACTGGGGATACAAAAGAAAACCAGGTAAGCCGCTCTATTGATGAACTTGCCCAACTTGATGCGCAAGAAGGAAAATCCCCTCTTGAGGCAGGGGACAAGCCAGAAGGTTTGGTTGATGAGGGTGATCCTCGGGAAGAGTTGACACAATTTTGTGAGAAGATGGATTCTAAAGGGCTACTGAATATCATCATGGAAAACCTGAAAAACCTTTCTGTCGCAGAGAACCTAAAAAACCTTTCTGTTGTTTGTAAGGAACAGCTTTCAGTTGTACTTGGCAGTGCAACTGAACCAGGCCGTTTGGTGGTAGATGCTCTGGAGAAATTTTTCTCTCCTGAAGAAATTACCCAACAGGGGTATAATAGGGATGCTGCCTTCACTGGCATGCTTCAGTCTTGTATAATACTTTTGGAAGCCTTGTCTGCCTTCTTATCAAAGGCTGACTCTGCTGCTGATAAATTTCTTAACCCTGAAACCAAGCAGCATGCTCTGTCTATTGCTAATAAGTGGAAGCCTATGTTGGCTGAGGGAAGCACTGATGCTACCAATGGGAAGTCATTGGAAGCAGAGGGGTTCTTGCGGCTGCTTGCAACCTTTAGGCTTGTGTCAGAGTTTGACGAAGAAGAACTCTGCAAGTATGTTCTTGCCGTTTCTCATCACTGGCAGGCAACTGAGCTCTGCCACTCCCTTGAATTGACTCAAAAGATACCAGGTTTAGTTGAGACTTTGATTACAAGTGGGCAACAGATTGATGCAGTACATTTTATCCATGCATTCCAGCTTACTGAGGCCTTTCCTCCTGCCCCCATCTTGAAGGCATTCTTGAAAGAGCTGAGGAGAAACTCTCAAGGAAATGGTGATGCTACATTACAGAACAATTACAATGCTCGAGAACTTGAGGCCTTAAGGGCTGTGATTGAGTGTGTCGAAGAGTATAAACTTGAAGCTGACTACCCTCTTGGTCCACTTCAGAAAAGGGTTGCCCAGCTAGATAAATCTACCAAGGGTGATAGGAAGAGAACAGGAGAAACAGGTAAGCAGCAGGAGCAAAAAAGGCCTCGGTCTAATGGAGAATTCCAGGGTCCTCGAGCTCGTGGCCCTAGTGGTGGGAGGCAGGGTCCACGGACCTCCACCAAGATGGTAGCATCTGCTGGATTTCGGGGGACGTATCCTTCTGCTGTTTCAAGTGCTTATAATTACTCCTTATCTCCCTACGTTGCTCAGGCAAGTGATCAAAGATCATATTACCATGCTCAAGACGACAGGGCTTCAGGTCCTTATGCTGCCACAGTCCCAGGTTACGCAGCTTATATGCAAGGAACACGCCGTCCTTACATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72887.p1 GENE.R_Transcript_72887~~R_Transcript_72887.p1 ORF type:complete len:576 (+),score=164.86,Frigida|PF07899.7|9e-90 R_Transcript_72887:287-2014(+)
MADTEKIVHINLTSSTELTKSLIEQLGKAFVELEACEVAYSSDVKLHDVEEHFHHMGAMMKKKLEELEAKEKIFAERESHNRMLISQREAAVITKEQDLLDKVQELKDAAVATIAEARGSHKPESLEPASTGDTKENQVSRSIDELAQLDAQEGKSPLEAGDKPEGLVDEGDPREELTQFCEKMDSKGLLNIIMENLKNLSVAENLKNLSVVCKEQLSVVLGSATEPGRLVVDALEKFFSPEEITQQGYNRDAAFTGMLQSCIILLEALSAFLSKADSAADKFLNPETKQHALSIANKWKPMLAEGSTDATNGKSLEAEGFLRLLATFRLVSEFDEEELCKYVLAVSHHWQATELCHSLELTQKIPGLVETLITSGQQIDAVHFIHAFQLTEAFPPAPILKAFLKELRRNSQGNGDATLQNNYNARELEALRAVIECVEEYKLEADYPLGPLQKRVAQLDKSTKGDRKRTGETGKQQEQKRPRSNGEFQGPRARGPSGGRQGPRTSTKMVASAGFRGTYPSAVSSAYNYSLSPYVAQASDQRSYYHAQDDRASGPYAATVPGYAAYMQGTRRPYM*

Click here to download the sequence:
Link to NCBI Protein BLAST