Transcript Information: R_Transcript_72892.p1


Annotated TAIR IDAT5G48385.1
Annotated Gene NameFRIGIDA-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19609471-19611712 | Forward length=558
E-Value8E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.950635673936
Replicate 26.6682061582706
Replicate 311.154909676302
Condition 2: 8 Hour
Replicate 110.288848788908
Replicate 210.597746931246
Replicate 313.451112104684
Condition 3: 24 Hour
Replicate 111.628465875922
Replicate 210.883946976946
Replicate 313.189659176143


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72892.p1 GENE.R_Transcript_72892~~R_Transcript_72892.p1 ORF type:complete len:614 (+),score=153.16,Frigida|PF07899.7|3.9e+03,Frigida|PF07899.7|9.9e-92 R_Transcript_72892:89-1930(+)
ATGGGTACCCATTTGACCCTAACACCAGGGAAAAAAAAGCGAGACTCTCGAGCAAAAAAACCAGACGTCGTTCAGTCTCTCTCTCTCCTCAACAAAAATCTTCAATCTCCGGTCTCAATCTCTGCTTGCCATCGCCGGAATCTTCCATCTCCGGAAAGGTGTGAAACCATCCAGTACATCGAAATGCCTGAAGCAGACGAAGTTGTTGACATGAATTTGACTTCATCTTTTGAGTGGACATCATCTCTTATAGAAAATCTGGGGAAGACATTTGCAGAGCTCGAAGCTCAAGAGGATTCTTGTATTGATAACATTCCATGGAAAGATGTCGAAGGACATTTTCGTTATTTGGAGTCTGTGATGAAAAAGAAACTTGAAGAACTTGATGCCAAGGAAAAGGAAGTTACAGAGAAAGAATCGCTGCTTGCTGAGAGAGAGGCTGTAGTTACTGCTAAGGAGCAAGATTTACTAGATAGAATGCAGGAACTAAAAGATGCTGCTGTGTCAGCCATCATGGAGGCAAGGGCTGTTTACAAGGTAAGCTGCTTTGATAATTATGAAACTGCCGAAGAGAAACATAGGGCAGAAGTTGTGGCTGCAGAGCTGAGACAATTTTGTGAACGGATGGATTCAAAGGGGCTTCTGAACTTTGTCATGGAGAACCTAAATGACCTTTCTGCTGTTTGTAGGAAACAGCTTTCTTTTGTACTTGTTAGTGCAACTGAACCAGCCCGGTTGGTGCTGGATGCACTAGAGGGATTCTTCCCTCCTAATGAATTGGCCCCAAATGGGGATGATAGGGACAATCCCCTTCATGGCATGCGTCAGTCTTGTCTTTTACTTATGGAAGCCTTGTGTGCCTTCCTGGCCAGGGCTGGTCCTTCTGCAGATAATTTTCTAAACCCTGAAATCAAGCAGATTGCCAAGGCAATTGCTGGCGAGTGGAAGCCTAAGTTGGCTCTGGAAAGCACTAGTGCTGCCAATGGAAAATCATTGGAGGCAAGGGCACTCTTGCGGCTTCTTGTAACCTTTAGGATTGCCTCAGAGTTTGATGAAGATGAACTCTGCAAGTACATTCTTGCAACTGCTCATCACAGGCAGGCAACTGAGCTCTGCCGTCCCCTTGAGTTGTCACAAAAGATACCAGGTATTGTTAAGACATTGATTGGAAATGGGAGAAACATTGAAGCTGTCAATTTTATTCTTTCATTCCAGCTCTCTGAGGCCTTTCCTCCGGTTCCCCTTTTGAAGGCATACCTGAAAGAGCTAAGGAGAAACTTGCAAGGGAATGGTGATGCTGAAACACAGAACAATTACAATGCACAAGAACTTGCTGCCATAAAGTCCGTGATGCGGTGCGTTAAAGAATACAAACTCGAAGGTGACTACCCACTCGATCAGCTTAGGAAAAGGTTTGTCCAGCTGCAGAATTCAGTTTCAGATAGAAAGAGGAAAAGAGAAAAAGGGAAACGTCGGCAAAATGGGTCACAGGATGTTAAAGAGTCTCATGAAACGAAAGTTCTTGTGTCTGAAAGTACCAGGCACAATCCACCACCCTTCTTGGAGGAGGGGGGAGCATATACTGGACTAACAGAGAGACACTCTTCTGCCTTTCCAAGTGCATACAACTATTCTCTATCTAGCCAAATTCCATATGCTGCTCAGGCAAATGACAGAGGTACATTTGGTTATACACTTTCTAGCCAATCTATATATGCAGCTCCGGTAAATGATGAAAATCCATATCACTATTCTCAAGTTGACAGGGCTTCTGTGCCTTATTCTACCACAGCCGCTAGTTATAGCGCTTACACACAGCCTCCACAACCACCTTATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72892.p1 GENE.R_Transcript_72892~~R_Transcript_72892.p1 ORF type:complete len:614 (+),score=153.16,Frigida|PF07899.7|3.9e+03,Frigida|PF07899.7|9.9e-92 R_Transcript_72892:89-1930(+)
MGTHLTLTPGKKKRDSRAKKPDVVQSLSLLNKNLQSPVSISACHRRNLPSPERCETIQYIEMPEADEVVDMNLTSSFEWTSSLIENLGKTFAELEAQEDSCIDNIPWKDVEGHFRYLESVMKKKLEELDAKEKEVTEKESLLAEREAVVTAKEQDLLDRMQELKDAAVSAIMEARAVYKVSCFDNYETAEEKHRAEVVAAELRQFCERMDSKGLLNFVMENLNDLSAVCRKQLSFVLVSATEPARLVLDALEGFFPPNELAPNGDDRDNPLHGMRQSCLLLMEALCAFLARAGPSADNFLNPEIKQIAKAIAGEWKPKLALESTSAANGKSLEARALLRLLVTFRIASEFDEDELCKYILATAHHRQATELCRPLELSQKIPGIVKTLIGNGRNIEAVNFILSFQLSEAFPPVPLLKAYLKELRRNLQGNGDAETQNNYNAQELAAIKSVMRCVKEYKLEGDYPLDQLRKRFVQLQNSVSDRKRKREKGKRRQNGSQDVKESHETKVLVSESTRHNPPPFLEEGGAYTGLTERHSSAFPSAYNYSLSSQIPYAAQANDRGTFGYTLSSQSIYAAPVNDENPYHYSQVDRASVPYSTTAASYSAYTQPPQPPYM*

Click here to download the sequence:
Link to NCBI Protein BLAST