Transcript Information: R_Transcript_73029.p1


Annotated TAIR IDAT1G22920.1
Annotated Gene NameCOP9 signalosome 5A
Annotated Gene Symbol(s)CSN5A, JAB1, AJH1
Annotation TypeOrtholog
Chromosome Positionchr1:8109882-8111895 | Reverse length=357
E-Value3.4E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 160.141793601473
Replicate 249.816959432771
Replicate 355.946482439933
Condition 2: 8 Hour
Replicate 152.713537674632
Replicate 263.126028361309
Replicate 374.309676722067
Condition 3: 24 Hour
Replicate 173.243406436911
Replicate 263.268437031951
Replicate 369.712046026901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_73029.p1 GENE.R_Transcript_73029~~R_Transcript_73029.p1 ORF type:complete len:373 (+),score=89.46,JAB|PF01398.17|2.6e-34 R_Transcript_73029:572-1690(+)
ATGGACCCAAACACCTTAACCTCATCAGCATCAATGGCGAAACAAACCTGGGAACTAGAAAACAACATAGTAAACATGGACCCACCACCACCACCACCATCATCATCATCCTCAACAACCCAAAACGCGGACCAATCAGATGCAATATTCTACTACGACGAGGTGGGGCAAGCAAAGTTCCAGCAAGAGAAGCCATGGGCGACTGATCCTCACTACTTCAAGAGGGTTAAGATCTCTGCACTCGCCCTCTTGAAGATGGTTGTACACGCGCGCTCTGGTGGGACCATTGAAGTTATGGGACTTATGCAAGGGAAGACTGATGGGGATGCCATCATTGTTATGGATGCTTTTGCTTTGCCTGTTGAAGGGACTGAGACTAGGGTTAATGCTCAGGCTGATGCTTATGAGTACATGGTTGATTATTCCCAGACCAATAAACAGGCTGGGCGGTTGGAAAATGTGGTTGGCTGGTATCATTCTCATCCCGGTTATGGGTGCTGGCTATCTGGAATTGATGTTTCAACACAAATGCTCAACCAGCAATTTCAGGAGCCATTTCTGGCTGTTGTTATTGATCCAACAAGGACTGTTTCTGCTGGAAAAGTTGAGATTGGAGCTTTCAGGACTTATCCAGAAGGCTATAAGCCTCCAGATGAGCCTATCTCAGAATATCAGACCATTCCGTTAAATAAGATTGAAGACTTTGGAGTCCACTGTAAACAGTATTATGCATTGGACATCACATATTTCAAGTCTTCACTTGATTCCCATCTATTGGATCTTCTTTGGAACAAATACTGGGTGAATACGCTTTCATCATCTCCTCTCTTGGGAAACAGAGATTATGTCGCTGGGCAAATTTCAGATCTAGCTGAGAAGTTGGAGCAAGCTGAGAATCAGCTGGCACATACCCGTTTTGGATCCATTATTGCACCTTCTCAAAGAAAGAAAGAGGAAGAGCCAGCACTTGCCAAGATTACTCGTGATAGTACAAAGATAACGGTTGAACAAGTTCATGGTTTAATGTCACAGGTCATCAAAGACATCCTATTTAATTCTGTTCGACCAAATCAGTCTCAAGGAGAGACATCGGGGCCTGAACCAATGGTAGAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_73029.p1 GENE.R_Transcript_73029~~R_Transcript_73029.p1 ORF type:complete len:373 (+),score=89.46,JAB|PF01398.17|2.6e-34 R_Transcript_73029:572-1690(+)
MDPNTLTSSASMAKQTWELENNIVNMDPPPPPPSSSSSTTQNADQSDAIFYYDEVGQAKFQQEKPWATDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNRDYVAGQISDLAEKLEQAENQLAHTRFGSIIAPSQRKKEEEPALAKITRDSTKITVEQVHGLMSQVIKDILFNSVRPNQSQGETSGPEPMVES*

Click here to download the sequence:
Link to NCBI Protein BLAST