Transcript Information: R_Transcript_73265.p1


Annotated TAIR IDAT5G45400.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70C, ATRPA70C
Annotation TypeOrtholog
Chromosome Positionchr5:18398990-18401644 | Forward length=853
E-Value1E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8698852996053
Replicate 25.7130314824243
Replicate 37.1856490552922
Condition 2: 8 Hour
Replicate 18.5297380492137
Replicate 29.1458719489078
Replicate 311.545305195289
Condition 3: 24 Hour
Replicate 113.289267961964
Replicate 210.702725284856
Replicate 311.835292655653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_73265.p1 GENE.R_Transcript_73265~~R_Transcript_73265.p1 ORF type:5prime_partial len:577 (+),score=114.03,Rep_fac-A_C|PF08646.6|63,Rep_fac-A_C|PF08646.6|1.3e-52,REPA_OB_2|PF16900.1|1.2e+02,REPA_OB_2|PF16900.1|6.9e-29,tRNA_anti-codon|PF01336.21|2e-10,tRNA_anti-codon|PF01336.21|6.9e+02,tRNA_anti-codon|PF01336.21|98,zf-CCHC|PF00098.19|0.06,zf-CCHC|PF00098.19|1e-05 R_Transcript_73265:2-1732(+)
TCTCGCGGGGAAGGGAAAGTGTTTTCCTTTGATCTGCTAGATTCAGATGGTGGAGAAATCCGAGTTACCTGCTTCAATGCTGTTGCTGATCAATTCTACAATCAAATTGAGGCTGGTAAGGTGTACTTGATTTCCAAAGGAACTGTGAGACCTGCTCAGAAGAATTTTAATCATCTGCAAAATGAGTATGAGATCCATTTGGACAACACATCACTGGTGCAGCCTTGTCTTGACAATGACAGTAGCATTCCGAGGCAGCAATTTCACTTTAAGTCTATCGGTGACATTGAGGGCTTGGAGAACAATAGTGTCATAGATTTGATTGGTGTAGTTTCTTTAATCAGTCCATCAGCTTCAATTATGAGGAAAAACGGCACTGAAACACAGAAGAGGAGCCTGCATTTGAAGGACATGTCTGGTAGAAGTGTTGAATTGACTTTGTGGGGAAACTTCTGTAATGCAGAAGGACAGACATTGCAAAATATGTGTGATGCCGGAAACTTTCCTGTTTTAGCTGTCAAAGCAGCCAGAGTTAATGAATTTAATGGCAAGGCAGTGGGAACTATTGGCACAAGTCAGTTATTTATAGAACCAGATTTTCCAGAAGCTCAGAGGCTAAAGGAATGGTTTGAAAAGGAGGGGAGGAATGCTCCTTCGGTTTCCATATCAAGGGAGATGACAAGTGTGGTCAGGAACGATGTACGGAAGACCATCTCTGATATTAAGGATGAGAAATTGGGGACTTCTGAGAAGCCAGATTGGATTATGGTCTTTGCTACCCTATCATTTATGAAATCGGACAACTTTTGCTATGCAGCATGCCCCATCTTGATTGGGGATCGCCAATGCAATAAAAAGGTCATAAATAATGGAGATGGGAAGTGGCGTTGTGATAGATGCGACCAGTCTGTTGATGAACCTGATTACAGGTATATTCTTCAGTTTCAAATACAGGATCATACAGGCGTGACCTGGGTCACTGCATTTCAGGAAGCTGGTGAAGATATTTTAGGCCTCTCCGCTAAAAGTTTGTTTCATCTGAAACATGAAGAAGGAGATGAAGAGAAAGTTCGGGAAATCATCCAAGAAGCTGTTTTTAGAAAGTACATGTTCAAGTTGAAAGTGAAGGAGGAGACGTTCAATGACGAGCAGCGAGTTAAATCAACAGTGGTCAAAGCAGAGAAAATTAATTTTGCAGCGGAAACAAGGTTTCTGTTTGGTTTGGTGGACAAGCTCAAGGTAGGGGGTTCAGGTGTCCTAGCTCCAAAACCAGAGGTTATGACTCCTGTGAAACCTGGAATTAATATTGTCGGGACTGGACAGCCTTCTGTTTCAGGTATCAGCGCTGGAACAAATATGGGCCTCACTGGTAGAGAAATGGGCATCTCCAGTAATCACACGAGCCATGGAAACCAATATAGTGGTGGGTATGGGGTTGCATCTGGTATGTATACAACCTGTAGTAGTTGTGGTGGTACTGGCCATAACGCAACAAATTGCCCTAGTATCATTAATGGTCCAGGGCAATCATCAGGAGCCTATTTCAATCAAACGCCAATTGGAGCTACGACCGGTACCAATTCTGGACAACAGTGCTTCAAATGCAATAAATTTGGGCACTTCGCAAGGGAGTGTCCTGGACTCAGTGCTGTGCCTCCCGCATATGGTAGCACTAATGTTGGTCCTGGAAGATATAGTGGTGTTCAGAGGCAACATGTTGGGGGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_73265.p1 GENE.R_Transcript_73265~~R_Transcript_73265.p1 ORF type:5prime_partial len:577 (+),score=114.03,Rep_fac-A_C|PF08646.6|63,Rep_fac-A_C|PF08646.6|1.3e-52,REPA_OB_2|PF16900.1|1.2e+02,REPA_OB_2|PF16900.1|6.9e-29,tRNA_anti-codon|PF01336.21|2e-10,tRNA_anti-codon|PF01336.21|6.9e+02,tRNA_anti-codon|PF01336.21|98,zf-CCHC|PF00098.19|0.06,zf-CCHC|PF00098.19|1e-05 R_Transcript_73265:2-1732(+)
SRGEGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIEAGKVYLISKGTVRPAQKNFNHLQNEYEIHLDNTSLVQPCLDNDSSIPRQQFHFKSIGDIEGLENNSVIDLIGVVSLISPSASIMRKNGTETQKRSLHLKDMSGRSVELTLWGNFCNAEGQTLQNMCDAGNFPVLAVKAARVNEFNGKAVGTIGTSQLFIEPDFPEAQRLKEWFEKEGRNAPSVSISREMTSVVRNDVRKTISDIKDEKLGTSEKPDWIMVFATLSFMKSDNFCYAACPILIGDRQCNKKVINNGDGKWRCDRCDQSVDEPDYRYILQFQIQDHTGVTWVTAFQEAGEDILGLSAKSLFHLKHEEGDEEKVREIIQEAVFRKYMFKLKVKEETFNDEQRVKSTVVKAEKINFAAETRFLFGLVDKLKVGGSGVLAPKPEVMTPVKPGINIVGTGQPSVSGISAGTNMGLTGREMGISSNHTSHGNQYSGGYGVASGMYTTCSSCGGTGHNATNCPSIINGPGQSSGAYFNQTPIGATTGTNSGQQCFKCNKFGHFARECPGLSAVPPAYGSTNVGPGRYSGVQRQHVGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST