Transcript Information: R_Transcript_73473.p1


Annotated TAIR IDAT1G80070.1
Annotated Gene NamePre-mRNA-processing-splicing factor
Annotated Gene Symbol(s)SUS2, EMB33, EMB177, EMB14
Annotation TypeOrtholog
Chromosome Positionchr1:30118052-30127574 | Forward length=2359
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.536712810032
Replicate 211.433893647755
Replicate 318.181493762651
Condition 2: 8 Hour
Replicate 121.451114283155
Replicate 221.668036181421
Replicate 330.016415525054
Condition 3: 24 Hour
Replicate 128.853169440251
Replicate 222.495240710551
Replicate 329.245540897433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_73473.p1 GENE.R_Transcript_73473~~R_Transcript_73473.p1 ORF type:complete len:2356 (+),score=433.81,PROCN|PF08083.7|3.7e-235,PRP8_domainIV|PF12134.4|9.6e-130,U6-snRNA_bdg|PF10596.5|2.4e-94,U6-snRNA_bdg|PF10596.5|0.046,PRO8NT|PF08082.7|3.3e-86,U5_2-snRNA_bdg|PF10597.5|3.7e-73,PROCT|PF08084.7|8.1e+03,PROCT|PF08084.7|4.1e-51,RRM_4|PF10598.5|2.1e-47,JAB|PF01398.17|7.9e+02,JAB|PF01398.17|4.6e-07 R_Transcript_73473:234-7301(+)
ATGTGGAACAACAACCAGCCACCGGCCCCGCCGGGGACATCGCTACCACCACCAGCAGCGATGCAACCGTCGTACACGGTCTTACATCCACCACAACCGCCACCTCAGCTGCAGGAGTCACCTGCAGATGCGGAGGCCAGGCTGGAGGAAAAGGCTCGTAAATGGATGCAGCTTAACTCCAAGCGTTATGGCGATAAGCGCAAGTTCGGCTTCGTCGAGACTCAGAAGGAGGACATGCCTCCTGAGCACGTCCGCAAGATTATTAGAGATCACGGTGACATGTCGTCTAAAAAATATCGTCATGATAAACGTGTTTACCTTGGTGCTCTGAAGTTTGTTCCACATGCTGTCTATAAGCTTCTCGAGAACATGCCGATGCCCTGGGAACAGGTTCGTGATGTCAAAGTTCTATATCATATTACTGGAGCAATCACATTTGTAAATGAAATACCTTGGGTTGTTGAGCCCATCTATCTGGCTCAGTGGGGTACAATGTGGATCATGATGCGAAGAGAGAAGAGAGACCGTCGGCACTTCAAAAGAATGAGGTTCCCTCCTTTTGACGATGAGGAGCCTCCACTGGATTATGCTGATAATGTTCTGGATGTTGATCCTTTGGAACCCATTCAACTGGAGTTGGATGAAGAAGAAGATTCTGCTGTCTGCACTTGGTTTTATGATCATAAACCTCTTGTCAAGACAAAGCTAATTAATGGGCCAAGTTATAGGAGATGGCATCTCTCCCTTCCAATAATGGCAACTCTCTATCGTTTTGCTGGGCAGTTGCTTTCTGATTTGGTGGACCGGAACTACTTCTACTTGTTCGACATGGAATCGTTTTTTACTGCAAAAGCATTGAACATGTGCATACCTGGAGGTCCTAAGTTTGAGCCTTTGTATCGTGACATGGAAAAAGGGGATGAGGACTGGAATGAGTTCAATGACATCAACAAACTCATTATCCGGTCACCACTTCGGACTGAGTATAGAATTGCATTTCCTCATCTCTACAATAATAGACCGAGGAAAGTTCGACTTGGTGTATATCATAGTCCTATGATTATGTATATAAAAACTGAAGATCCAGATCTCCCAGCATTTTATTATGATCCACTCATTCACCCTATAACTACCTCTCATAAGGATCGCCGGGAGAAAAAAGTGTATGAAGAGGAGGATGATGATGATTTCGAGCTTCCTGAAGGTGTTGAACCATTGCTCACTGACACCCAGCTTTACACGGACACTACAGCTGCAGGAGTCTCACTGTTGTATGCACCAAGGCCATTCAACATGAGATCTGGTCGCACACGACGTGCTGAAGATATACCCCTTGTCTCAGAATGGTACAAGGAGCATTGCCCTCCTTCGTATCCTGTTAAAGTTCGAGTCAGCTATCAGAAGTTGCTAAAATGTTTTGTGCTGAATGAGTTGCATCACAGACCACCAAAAGCCCAGAAGAAGAAGCATCTTTTCAGATCTCTTGCAGCTACCAAGTTTTTCCAGAGTACTGAACTAGATTGGGTTGAAGCTGGTCTCCAGGTATGCAGGCAAGGATACAACATGCTAAACCTGCTGATTCACAGGAAGAATTTGAACTATCTGCATCTTGATTATAATTTCAATCTGAAGCCTGTTAAGACGCTTACTACTAAGGAACGTAAAAAGTCGCGGTTTGGGAATGCGTTTCATCTTTGTCGTGAAATCCTTCGGTTAACAAAGCTTGTAGTTGATGCCAATGTTCAATTTCGCTTGGGCAATGTGGATGCCTTCCAATTAGCTGATGGTTTGCAGTACATATTTTCACATGTTGGGCAGCTGACTGGTATGTATCGTTACAAGTATAGACTCATGAGACAGATCAGAATGTGCAAGGACTTGAAGCACTTGATTTATTACCGTTTTAACACCGGGCCAGTTGGGAAGGGGCCTGGATGTGGTTTCTGGGCACCGATGTGGAGGGTCTGGCTCTTCTTCCTTCGTGGTATTGTGCCGTTGCTGGAAAGATGGTTAGGAAATCTACTTGCTAGACAATTTGAGGGTCGTCATTCCAAAGGCGTGGCAAAAACAGTTACTAAACAGCGTGTGGAAAGCCACTTTGATCTAGAGCTTCGAGCTGCGGTTTTGAACGATGTGCTTGATGCCATGCCAGAGGGGACTAAGCAAAATAAGTCAAGAACCATCCTGCAGCATCTAAGTGAAGCTTGGCGCTGTTGGAAAGCAAACATTCCCTGGAAAGTTCCAGGTTTGCCTGTTCCCATTGAAAATATGATCCTTCGTTATGTCAAGGCAAAAGCTGATTGGTGGACGAATGTTGCTCATTACAATCGTGAACGTATCAGAAGGGGAGCAACAGTTGATAAGACAGTTTGTCGTAAGAATCTTGGGAGGTTGACTCGTTTGTGGCTGAAGGCAGAGCAAGAACGTCAGCACAATTATCTGAAGGATGGTCCATATGTTACACCGGAAGAAGCTGTAGCTATTTATACCACAACTGTGCATTGGCTAGAGTCAAGAAAGTTCTCTCCTATACCATTCCCTCCTCTGTCTTATAAGCACGACACCAAGCTGCTTATCCTTGCTCTGGAGAGGTTAAAGGAATCTTATAGTGTTGCTGTTAGATTGAACCAACAGCAAAGAGAAGAACTGGGTCTTATTGAACAGGCTTATGATAACCCTCATGAAGCTTTGTCAAGAATCAAGCGTCACCTGCTCACCCAGCGTGCATTTAAAGAAGTAGGGATTGAGTTCATGGATCTTTATAGCTATCTCATTCCTGTCTATGAGATTGAGCCACTTGAAAAGATTACTGATGCCTATCTTGACCAGTATCTATGGTATGAAGGTGACAAGAGGCATCTGTTCCCTAACTGGGTCAAGCCTGCGGATACTGAGCCTCCGCCACTTTTGGTATACAAATGGTGCCAGGGGATTAACAATCTGCAAGGTATATGGGATACTAGTGAGGGGCAGTGTGTGGTGATGCTCCAAACCAAATTTGAGAAGTTCTTTGAGAAGATTGATTTGACCATGCTTAACAGACTACTTCGTTTGATCCTTGATCACAATATTGCTGACTATGTTACTGCAAAGAACAACGTGGTGCTGTCCTACAAGGACATGAGTCATACCAATTCATATGGGCTGATACGTGGGCTTCAGTTTGCCTCGTTTGTTGTACAGTATTATGGTCTTGTGCTTGATCTTCTTCTCCTAGGATTGACTAGAGCCAGTGAAATCGCTGGTCCACCTCAAATGCCAAATGAGTTTATGACTTATTGGGATACCAAGGTGGAAAGTAGACACCCTATCCGGCTGTATTCTCGTTATATTGACAAGGTGCATATATTGTTCCGCTTCACCCATGAAGAAGCACGGGATCTTATCCAGCGGTACCTTACTGAGCATCCTGATCCCAACAATGAGAATATGGTGGGATACAACAACAAGAAGTGTTGGCCAAGAGATGCTCGTATGAGACTCATGAAGCATGATGTTAACTTGGGTAGAAGTGTCTTCTGGGACATGAAGAATCGCCTTCCACGGAGTATAACTACCTTAGAATGGGAGAACAGTTTTGTGTCTATCTACAGCAAGGACAATCCTAACTTGCTTTTCAGCATGTGTGGGTTTGAGGTACGGATATTGCCTAAGGTAAGGATGACACAAGAGGCATTCAGCAATACAAAAGATGGGGTCTGGAACTTGCAGAATGAACAGACCAAAGAGCGAACTGCTGTTGCTTTCTTGAGGGTTGATGAGGAACACATGAAGGTATTTGAAAATAGGGTGAGGCAGATTCTTATGTCTTCAGGATCTACAACGTTCACCAAAATTGTCAACAAATGGAACACTGCACTCATTGGTCTTATGACCTATTTCCGTGAAGCAACTGTGCATACTCAGGAGCTGTTGGACTTGCTGGTGAAGTGTGAGAACAAAATCCAGACTCGTATTAAGATCGGTTTGAACTCAAAAATGCCTAGTAGGTTTCCTCCTGTTATTTTCTATACACCAAAGGAAATTGGAGGTCTTGGTATGCTGTCAATGGGTCACATTCTGATTCCCCAAAGTGACCTTCGGTACAGCAAACAGACTGATGTTGGTGTGACTCACTTTAGGAGTGGGATGAGCCATGAAGAGGATCAGCTCATACCAAATCTATATCGCTACATACAGCCATGGGAGAGTGAGTTCATTGATTCACAGCGTGTCTGGGCTGAGTATGCGCTGAAGAGGCAGGAAGCTCAGTCACAGAATAGGCGTTTAACACTCGAGGATCTGGAAGATTCCTGGGATCGTGGTATACCACGAATCAATACATTGTTTCAAAAGGATCGCCATACTTTGGCATATGACAAAGGATGGAGAGTCCGTACTGATTTTAAGCAATACCAAGTCTTGAAGCAGAACCCATTCTGGTGGACTCATCAGCGTCATGATGGCAAGCTGTGGAACTTGAACAATTACAGAACTGACGTCATTCAGGCACTAGGAGGAGTTGAAGGAATTCTGGAGCATACTTTGTTCAAGGGAACATATTTCCCAACATGGGAGGGTCTTTTCTGGGAAAAGGCATCTGGTTTCGAGGAGTCCATGAAGTACAAGAAATTGACAAATGCTCAAAGGTCTGGTTTGAACCAGATTCCCAACCGTAGGTTTACCCTCTGGTGGTCTCCTACAATCAATCGGGCAAATGTCTATGTGGGTTTCCAGGTGCAACTTGATCTGACTGGAATATTTATGCATGGAAAGATCCCGACATTGAAGATATCGCTGATTCAGATATTCCGAGCACATCTATGGCAGAAAATCCATGAAAGTGTTGTCATGGATCTTTGTCAAGTTCTGGATCAGGAGTTGGATGCCTTGGAAATTGAGACAGTTCAAAAGGAAACAATTCATCCTAGGAAAAGTTACAAAATGAATAGTTCCTGTGCTGACGTACTTCTCTTCGCAGCACATAGATGGCAAATGTCAAAACCCAGTCTGGTTGCAGAGACAAAAGATGTATTTGACCAGAAGGCCAGCAACAAGTACTGGATAGATGTGCAGCTCCGTTGGGGAGATTATGATTCTCATGATATTGAGCGTTACACTAGAGCTAAATTCTTGGATTACACCACAGATAACATGTCCATCTATCCATCACCAACCGGAGTGATGATTGGGATAGATCTTGCTTACAACTTGCATTCTGCTTTCGGCAACTGGTTCCCTGGGTCAAAACCATTGCTTGCACAAGCCATGAATAAGATCATGAAGTCAAATCCTGCGCTGTATGTCTTGAGAGAACGTATAAGAAAAGGTCTTCAGTTGTACTCTTCTGAGCCTACTGAGCCATACTTGTCGTCCCAAAACTATGGAGAGATTTTCAGTAATCAAATCATATGGTTTGTTGATGATACTAATGTCTACCGAGTCACAATCCACAAGACTTTTGAAGGAAATCTGACCACAAAACCTATCAATGGAGCCATATTCATATTTAATCCACGGACTGGGCAACTCTTTTTGAAGGTTATTCACACCAGTGTTTGGGCTGGACAGAAGCGTCTAGGTCAGTTGGCTAAGTGGAAAACAGCTGAAGAAGTTGCAGCTCTTGTTCGGTCTTTACCAGTTGAGGAACAGCCAAAACAGATTATTGTGACACGTAAAGGAATGTTGGATCCACTTGAAGTCCACTTGCTTGATTTCCCAAACATAGTTATCAAAGGAAGTGAGCTGCAACTTCCTTTCCAGGCTTGCTTAAAGATTGAGAAATTTGGTGATCTCATTCTGAAGGCAACAGAGCCACAGATGGTGTTGTTCAACATTTATGATGATTGGCTGAAGAGTATTTCTTCATACACAGCATTCTCTCGGCTAATTCTCATTTTGCGTGCACTTCATGTCAATAATGAGAAGGCAAAAATGTTGCTGAAGCCCGACAGGACTGTTGTCACCGAACCGCATCACATCTGGCCATCACTTACTGATGATCAGTGGATGAAGGTTGAGGTGGCTTTGAGAGATCTTATACTTTCCGATTATGCCAAGAAGAATAATGTGAACACATCTGCGTTAACACAATCTGAAATTCGGGATATCATTCTTGGAGCAGAAATCACTCCTCCCTCTCAGCAGAGGCAGCAGATTGCTGAGATCGAGAAGCAGGCTAAGGCCACAAATCAACTGACGGCAGTCACAACTAGGACGACAAATGTGCATGGTGATGAATTAATCGTCTCCACAACAAGTCCCTATGAGCAGGCAGCCTTTGGCTCTAAGACTGACTGGCGTGTCAGAGCAATTTCTGCAACAAATCTCTACCTCCGTGTAAACCATATTTATGTTAACTCAGAGGACATAAAGGAGACGGGTTACACATACATCATGCCTAAGAACATTTTGAAGAAGTTCATCTGCATAGCTGATCTGAGGACACAGATTTCTGGGTACTTGTATGGTATAAGCCCTCCTGACAACCCCCAGGTCAAAGAGATACGCTGCATTGCCATGCCACCTCAATGGGGAACTCATCAGCAGGTGCATCTTCCTTCACAGCTGCCTGAGCACGATTTCCTGAATGATTTGGAACCCTTGGGGTGGATGCACACACAACCAAATGAACTGCCTCAGCTATCACCACAGGATGTCACAAGTCATGCTCGCATCTTGGAGAACAATAAACAGTGGGATGGCGAGAAATGCATCATCCTCACATGCAGTTTTACTCCTGGTTCATGTTCATTGACTGCATACAAGCTCACCCCATCGGGGTACGAGTGGGGACGTGCTAACAAGGATACTGGAAGTAACCCGCATGGTTATCTTCCAACTCACTATGAGAAAGTCCAGATGCTTCTTAGTGATCGGTTCCTCGGTTTCTATATGATACCTGATAGCAGCCCCTGGAATTACAACTTTATGGGAGTGAAGCATACAGTGAGCATGAAATATGGTGTCAAGCTCGGTGCACCAAGGGAGTACTATCACGAGGACCATAGACCTACTCATTACTTGGAATTCAGTAACATGGAAGAGGGTGATACCGCAGAAGGAGATAGAGAGGACACATTTACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_73473.p1 GENE.R_Transcript_73473~~R_Transcript_73473.p1 ORF type:complete len:2356 (+),score=433.81,PROCN|PF08083.7|3.7e-235,PRP8_domainIV|PF12134.4|9.6e-130,U6-snRNA_bdg|PF10596.5|2.4e-94,U6-snRNA_bdg|PF10596.5|0.046,PRO8NT|PF08082.7|3.3e-86,U5_2-snRNA_bdg|PF10597.5|3.7e-73,PROCT|PF08084.7|8.1e+03,PROCT|PF08084.7|4.1e-51,RRM_4|PF10598.5|2.1e-47,JAB|PF01398.17|7.9e+02,JAB|PF01398.17|4.6e-07 R_Transcript_73473:234-7301(+)
MWNNNQPPAPPGTSLPPPAAMQPSYTVLHPPQPPPQLQESPADAEARLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVDPLEPIQLELDEEEDSAVCTWFYDHKPLVKTKLINGPSYRRWHLSLPIMATLYRFAGQLLSDLVDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVRLGVYHSPMIMYIKTEDPDLPAFYYDPLIHPITTSHKDRREKKVYEEEDDDDFELPEGVEPLLTDTQLYTDTTAAGVSLLYAPRPFNMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVLNDVLDAMPEGTKQNKSRTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKAKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADTEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLILDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFMTYWDTKVESRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSIYSKDNPNLLFSMCGFEVRILPKVRMTQEAFSNTKDGVWNLQNEQTKERTAVAFLRVDEEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWQMSKPSLVAETKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFLDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDRTVVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKATNQLTAVTTRTTNVHGDELIVSTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSQLPEHDFLNDLEPLGWMHTQPNELPQLSPQDVTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRANKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMIPDSSPWNYNFMGVKHTVSMKYGVKLGAPREYYHEDHRPTHYLEFSNMEEGDTAEGDREDTFT*

Click here to download the sequence:
Link to NCBI Protein BLAST