Transcript Information: R_Transcript_73512.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9596370325051
Replicate 22.6661968782601
Replicate 33.0299917455228
Condition 2: 8 Hour
Replicate 12.5910968198143
Replicate 23.4310347798645
Replicate 35.3782549986332
Condition 3: 24 Hour
Replicate 12.7938072287682
Replicate 22.9173622871134
Replicate 33.2426229165774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_73512.p1 GENE.R_Transcript_73512~~R_Transcript_73512.p1 ORF type:complete len:189 (+),score=33.78,RVT_2|PF07727.10|1.7e-06 R_Transcript_73512:674-1240(+)
ATGACTTCTAAGATAGACATTAAGAAGTTCGATGACAAGATTAGTTTTGCCATGTGGCAAGTACAAATGAAAGCCGCGCTCACTCTTCAAGGCTTGGTACCCTTGAATTTTTTGGGTTGTCACTACTCTGTTCAAGGTGGAGTTCTTAAAGTGTTTAAGGGTGTACTTATTTTAATGAAAGGCTCTAGAGTTGGGTCTTTGTATATTTTGCAAGGTTCTACCATCACAGGTTCCGCTACCGTTGCTTCCACATCAAATTCCCAAGTGCAAGCATCTTCAAGCTCTCCTACTCCATCTATTCAACCTTCAATAGCTCGTTATCATGGGAAAAGAGCTCGCAAGGTACCGGAGAGATTAAAGGACTGTGATCGTGATATTGTGGCCTATGCATACACCGTTGAAGATCGTGAAGTTGTTGATCTTCCTAAAGGTAAATGGATATTCAAGAATGGCATTCCCGGGGTTGAGTCTAAGAAAGTCAAGACTCATTTTGTTGCTCGTAGATTTACTCAAGTTGATGGTGTTGATTTCCATGAGATATTTTCTCCGGTTGTTCTATCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_73512.p1 GENE.R_Transcript_73512~~R_Transcript_73512.p1 ORF type:complete len:189 (+),score=33.78,RVT_2|PF07727.10|1.7e-06 R_Transcript_73512:674-1240(+)
MTSKIDIKKFDDKISFAMWQVQMKAALTLQGLVPLNFLGCHYSVQGGVLKVFKGVLILMKGSRVGSLYILQGSTITGSATVASTSNSQVQASSSSPTPSIQPSIARYHGKRARKVPERLKDCDRDIVAYAYTVEDREVVDLPKGKWIFKNGIPGVESKKVKTHFVARRFTQVDGVDFHEIFSPVVLSM*

Click here to download the sequence:
Link to NCBI Protein BLAST