Transcript Information: R_Transcript_73538.p1


Annotated TAIR IDAT3G50670.1
Annotated Gene NameU1 small nuclear ribonucleoprotein-70K
Annotated Gene Symbol(s)U1-70K, U1SNRNP
Annotation TypeOrtholog
Chromosome Positionchr3:18826476-18829492 | Reverse length=427
E-Value7.5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.339591947905
Replicate 220.139308562572
Replicate 331.438328639617
Condition 2: 8 Hour
Replicate 137.853148362323
Replicate 236.963906717062
Replicate 343.434211127355
Condition 3: 24 Hour
Replicate 150.835144575631
Replicate 237.696488409915
Replicate 342.100329933471


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_73538.p1 GENE.R_Transcript_73538~~R_Transcript_73538.p1 ORF type:3prime_partial len:196 (+),score=43.63,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 R_Transcript_73538:171-755(+)
ATGGGTGACTTCAACAACAACAACAATAACGATGCTTTTCTCCGCAACCAAAACGCTGCCGTTCAGGGCCGCACCAAGGCCCAGAATCGCGCTAATGTTCTTCAGCTCAAAATGATTGGACAATCTCATCCAACTGGTTTGACGCCTAATCTACTGAAGCTTTTCGAGCCTCGACCTCCGTTGGAGTACAAATCACCACCTGAGAAAAGAAAATGTCCACCATATACTGGAATGGCGCAATTTGTGGCTCTCTTTGCTGAGCCTGGGGATCCTGAGTACGCCCCACCCGTTCCTGAAGTTGAGACCCCTTCACAAAGAAGGGCCAGAATCCACCAGTTACGACTTGAGAAGGGTGCAGCAAAGGCTGCTGAAGAGTTTGAGAAATATGATCCACAAAATGATCCTAATGTCACTGGAGATCCATACAAGACACTTTTTGTAGCCAGGCTGAGTTATGAGACCTCAGAGAGCAGACTAAAAAGGGAGTTTGAAACTTATGGGCCCATAAAGCGGGTGAAGATGGTTTATGACAAGGATACCAACAAACCCAAAGGCTATGCTTTCATTGAATATGCTCATACAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_73538.p1 GENE.R_Transcript_73538~~R_Transcript_73538.p1 ORF type:3prime_partial len:196 (+),score=43.63,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 R_Transcript_73538:171-755(+)
MGDFNNNNNNDAFLRNQNAAVQGRTKAQNRANVLQLKMIGQSHPTGLTPNLLKLFEPRPPLEYKSPPEKRKCPPYTGMAQFVALFAEPGDPEYAPPVPEVETPSQRRARIHQLRLEKGAAKAAEEFEKYDPQNDPNVTGDPYKTLFVARLSYETSESRLKREFETYGPIKRVKMVYDKDTNKPKGYAFIEYAHTR

Click here to download the sequence:
Link to NCBI Protein BLAST