Annotated TAIR ID | AT3G50670.1 |
Annotated Gene Name | U1 small nuclear ribonucleoprotein-70K |
Annotated Gene Symbol(s) | U1-70K, U1SNRNP |
Annotation Type | Ortholog |
Chromosome Position | chr3:18826476-18829492 | Reverse length=427 |
E-Value | 7.5E-114 |
Replicate 1 | 33.339591947905 |
Replicate 2 | 20.139308562572 |
Replicate 3 | 31.438328639617 |
Replicate 1 | 37.853148362323 |
Replicate 2 | 36.963906717062 |
Replicate 3 | 43.434211127355 |
Replicate 1 | 50.835144575631 |
Replicate 2 | 37.696488409915 |
Replicate 3 | 42.100329933471 |
>R_Transcript_73538.p1 GENE.R_Transcript_73538~~R_Transcript_73538.p1 ORF type:3prime_partial len:196 (+),score=43.63,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 R_Transcript_73538:171-755(+)
ATGGGTGACTTCAACAACAACAACAATAACGATGCTTTTCTCCGCAACCAAAACGCTGCCGTTCAGGGCCGCACCAAGGCCCAGAATCGCGCTAATGTTCTTCAGCTCAAAATGATTGGACAATCTCATCCAACTGGTTTGACGCCTAATCTACTGAAGCTTTTCGAGCCTCGACCTCCGTTGGAGTACAAATCACCACCTGAGAAAAGAAAATGTCCACCATATACTGGAATGGCGCAATTTGTGGCTCTCTTTGCTGAGCCTGGGGATCCTGAGTACGCCCCACCCGTTCCTGAAGTTGAGACCCCTTCACAAAGAAGGGCCAGAATCCACCAGTTACGACTTGAGAAGGGTGCAGCAAAGGCTGCTGAAGAGTTTGAGAAATATGATCCACAAAATGATCCTAATGTCACTGGAGATCCATACAAGACACTTTTTGTAGCCAGGCTGAGTTATGAGACCTCAGAGAGCAGACTAAAAAGGGAGTTTGAAACTTATGGGCCCATAAAGCGGGTGAAGATGGTTTATGACAAGGATACCAACAAACCCAAAGGCTATGCTTTCATTGAATATGCTCATACAAGG
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_73538.p1 GENE.R_Transcript_73538~~R_Transcript_73538.p1 ORF type:3prime_partial len:196 (+),score=43.63,U1snRNP70_N|PF12220.4|4.1e-20,U1snRNP70_N|PF12220.4|3.1e+03,RRM_1|PF00076.18|2.9e-13,RRM_6|PF14259.2|6.1e-07 R_Transcript_73538:171-755(+)
MGDFNNNNNNDAFLRNQNAAVQGRTKAQNRANVLQLKMIGQSHPTGLTPNLLKLFEPRPPLEYKSPPEKRKCPPYTGMAQFVALFAEPGDPEYAPPVPEVETPSQRRARIHQLRLEKGAAKAAEEFEKYDPQNDPNVTGDPYKTLFVARLSYETSESRLKREFETYGPIKRVKMVYDKDTNKPKGYAFIEYAHTR
Click here to download the sequence:
Link to NCBI Protein BLAST