Transcript Information: R_Transcript_74247.p1


Annotated TAIR IDAT1G76630.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28759699-28765042 | Forward length=1168
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6927228435452
Replicate 20.61475654372044
Replicate 31.7541195456513
Condition 2: 8 Hour
Replicate 10.77207682266088
Replicate 20.78061637058193
Replicate 33.1070324485347
Condition 3: 24 Hour
Replicate 12.7404589708746
Replicate 21.5895682083299
Replicate 32.8592046663064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74247.p1 GENE.R_Transcript_74247~~R_Transcript_74247.p1 ORF type:3prime_partial len:888 (+),score=160.84,TPR_11|PF13414.2|0.89,TPR_11|PF13414.2|7.2e-05,TPR_11|PF13414.2|0.4,TPR_11|PF13414.2|0.055,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|1.3,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|5.5e+03,TPR_11|PF13414.2|0.00072,TPR_11|PF13414.2|14,TPR_11|PF13414.2|0.6,TPR_11|PF13414.2|1.1e+03,TPR_11|PF13414.2|1e+03,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|1.3,TPR_2|PF07719.13|11,TPR_2|PF07719.13|5.6e+03,TPR_2|PF07719.13|0.00015,TPR_2|PF07719.13|6e+03,TPR_2|PF07719.13|1.2e+02,TPR_2|PF07719.13|22,TPR_2|PF07719.13|1.2e+03,TPR_2|PF07719.13|9.2e+02,TPR_12|PF13424.2|0.11,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|7.1e+02,TPR_12|PF13424.2|0.13,TPR_12|PF13424.2|0.023,TPR_12|PF13424.2|3.7e+02,TPR_12|PF13424.2|9.6e+03,TPR_1|PF00515.24|25,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|6.7,TPR_1|PF00515.24|7.6,TPR_1|PF00515.24|7.9e+02,TPR_1|PF00515.24|0.00018,TPR_1|PF00515.24|4.9e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|7.7e+02,TPR_1|PF00515.24|4.9e+03,TPR_1|PF00515.24|3.9e+02,TPR_14|PF13428.2|5.4,TPR_14|PF13428.2|8.2e+02,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|9.3e+03,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|5.3e+02,TPR_14|PF13428.2|24,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|7e+03,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|2.9e+02,TPR_16|PF13432.2|1.7e+02,TPR_16|PF13432.2|0.14,TPR_16|PF13432.2|7.8e+03,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|0.72,TPR_16|PF13432.2|3.4e+03,TPR_16|PF13432.2|0.0011,TPR_16|PF13432.2|6.3e+03,TPR_17|PF13431.2|9.7,TPR_17|PF13431.2|0.81,TPR_17|PF13431.2|3.6e+03,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|7.4e+02,TPR_17|PF13431.2|5.5,TPR_17|PF13431.2|3.2e+02,TPR_8|PF13181.2|7.2e+02,TPR_8|PF13181.2|2e+02,TPR_8|PF13181.2|25,TPR_8|PF13181.2|7.4e+02,TPR_8|PF13181.2|5.8e+03,TPR_8|PF13181.2|0.0025,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|1e+03,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|6.5e+03,TPR_8|PF13181.2|7.2e+03,TPR_19|PF14559.2|5.1e+02,TPR_19|PF14559.2|3.9e+03,TPR_19|PF14559.2|25,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|7.9e+03,TPR_19|PF14559.2|7.5,TPR_19|PF14559.2|0.045,TPR_19|PF14559.2|1.2e+04,TPR_19|PF14559.2|3e+02,TPR_6|PF13174.2|1.6e+04,TPR_6|PF13174.2|1.6e+03,TPR_6|PF13174.2|11,TPR_6|PF13174.2|0.12,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.6e+03 R_Transcript_74247:212-2872(+)
ATGACGCACAAGGACAAGGACGATGATGATGATGTAATTATGTGGAATCGTTTACAAGAATTCGTAGAGTCTCATCCAGAAGACCCTTTCCATAGATTCAACCTCGGGAGATATTTGTGGGAAAGAGGGGACGAATGGAAGGAGAAAGCAACAGAGCACTTTTTGATGGCGGCAAAGTTGAATCCGCAAAATGGAGAAGCCTTCAGATACTTAGGTCATTACTACAGCAGTGTGGATACTCAAAGAGCTCTCAAATGCTATCATCGTGCTATCTCCCTCGACTCCCATGATTTCCACTCCGGGGAAGCATTGTGTAATTTGTTGGACAAAGACGGAAAGGAAAGCTTGGAGATTGCTGTGTGCAAGGAGGCCTCGACCAAGTCCCCTCGTGCCTTCTGGGCTTCTCGCAGATTAGGTTTCCTGCTGGTCCACCAAAAAAAATGGTCTGAAGCTGTGCAGAGTCTTCAGCATGCTATCCAAGGCTATCCAACTTGTGCTGATCTCTGGGAAGTGCGGGAGCGTGACTATCTCTCTTTCTTCCTGTTTACCCTTATATACTATGCTGACTTGATATTATTGTTTATAACATATGTTTACTCTTTGTTTCTTTCCCTAGGCTTTAGGTCTTGCCTACCAACGACTTGGCATGTATACTGCTGCCATCAAGATGCCTCCTTGGACATATTAAGTCAGTGGATATCATGCTGTCTGCAGTCATATGGGCGAGCAATGGAGTTGGAAAGTTCAAGAAATTTTGCAATGGTTGAGTGTGGAAATATATTTCTAATGCTTGGTTTGTTTAGAAAGGGAATAGAGCAGTTTCGCCATGCTCTACAAATATGCTCTCATAGTGTATCTGCACAATGTGGGCTTGCTTCTGGGCTTCTTGCTATGTCAAAAGAATCCATCAACCTGGGTGCATTTGGATGGTCAATATCTCTGTTGGAGGAGGCATCTGAAATCGCAAAAGCAAGCACCGCTTTGGCTGCTAATATGTCGTGTGTGTGGAAGCTTTATGCTGATATTCAGCTTACATATGGCAAATGCTTTCCATGGACAAAAGGAGGGAATCACAAAGATGAAGAAGGCTTTTCCGGGTCACTAAAGTCCTGGTGCAAAACTCGCTATTCAGCTGCTATATCTGCCAATTGTTCTTATCAGCGCGCTTTGCATTTGGCACCATGGCAAGCAAATATCTATATGGATGTTGCTGTAGCATTGGATCTTATTTGGTCTTTAGAGGGCTGTCATGAAGATGATCGTGGCTCTTGGCAGCTCGCCGAGAAAATGATGCTGGGGAGCTTATCACTAGAAGGTGAAAATTATGAATTTTGGATGGCATTGGGAAGCTTTTCTCGAATTAAAGCATTGAAACAGCATGCCTTTATCCGGGGGTTACAGTTAGATGTCTCTCTAGCTTCTGCTTGGGCATATCTTGGGAAGCTATACAGAGAAGAGGGTCAAACTCAACTGGCTAGACAAGCATTTGATAAGGCTCGAAGTATAGATCCTTCTCTTGCATTGCCATGGGCAGGCATGTCAGCTGATATATTTACCAGGAATCCTCAATCAGATGAGGCCTATGACAGTTGCTTACGAGCTGTTCAAATAATACCTATTGCTGAGTTTCAGATTGGTTTGGCCAAAATTGCTCTGCTTTCCGGCCACCTTTTATCTTCAGAGGTTTTCGCAGCTATCAGGCAAGCTGTACAATGTGCGCCTTGCTATCCTGAATCTCATAATCTGAGTGGACTTGTTTCAGAGGCTCGTTGTGATTATGAGTCTGCTGTTTCATCCTATCAGCTAGCACGTTATGCTTTAAAGGCTTCTACATCTGATTTGTCACATTCTCATTTTGCTGATGTGTCAGTTAATTTGGCAAGGGCGCTTTGTAGGGCAGGGAATCTGCATGATGCTGTGAAAGAATTGGAAGATTTGAAGAAAGGAGGTTTTCTTGATGTGGAAGGCTTACAAATATATGCTATATCCTTGTGGAAGCTTGGAAATAATGACTTGGCCCTTTCTGCTTCTAGAGATCTCGCTAAACTTGTTCCTGTGATCAAGCAGTCCTCTGCAGCTGCATGTATATGTTTAGTTTGTGCTATTTTGTACCACTTATCCGGGGTGGGATCAGCTGTCAATAGTATCTTGAAAACTCCCAGGGAGCTGCTCCAAGTTGCTAAAGTTAGCTTCTTAGTATCTGCTGTTGGTGCTGTTGACCAGAGTAATCAGCTCCAGTCTGTAATCTCAAGCAGTCGGTGCTCCCTTTCATTACATCAAGAGATAGTTGAAATGCATCTTCTAATTGCACTGAGCAAAGCAATCAGAAATGCTCCAGGGCAAAATCTTCATATACAAAGTGGTATTGATCATCTTAGAAAGGCATTACATATGTACCCCAATGTCAATTTGTTAAGGAACATGCTTGGATATTTCTTGTTGTCTAGCAAACAATGGGAGAATGGTCATGTTGTAAAGAGATGTTGTGCTGTAGTTTCTTTGGAAAGTTCGGTTAAGGAAGACTTTAGATCTGCACAAGAAGTTATTGGCGCCGAAGGTGTTGCTTGTCAGGCCATTGTCACCCCCTGTAGATTGGCCAGCTCTCTTCCAACATGTAAATACCAAAGCATGCAAGGTGTATCATCAATGGTGATTATGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74247.p1 GENE.R_Transcript_74247~~R_Transcript_74247.p1 ORF type:3prime_partial len:888 (+),score=160.84,TPR_11|PF13414.2|0.89,TPR_11|PF13414.2|7.2e-05,TPR_11|PF13414.2|0.4,TPR_11|PF13414.2|0.055,TPR_11|PF13414.2|2.9,TPR_11|PF13414.2|1.3,TPR_11|PF13414.2|1.2e+03,TPR_11|PF13414.2|5.5e+03,TPR_11|PF13414.2|0.00072,TPR_11|PF13414.2|14,TPR_11|PF13414.2|0.6,TPR_11|PF13414.2|1.1e+03,TPR_11|PF13414.2|1e+03,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|1.3,TPR_2|PF07719.13|11,TPR_2|PF07719.13|5.6e+03,TPR_2|PF07719.13|0.00015,TPR_2|PF07719.13|6e+03,TPR_2|PF07719.13|1.2e+02,TPR_2|PF07719.13|22,TPR_2|PF07719.13|1.2e+03,TPR_2|PF07719.13|9.2e+02,TPR_12|PF13424.2|0.11,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|0.18,TPR_12|PF13424.2|7.1e+02,TPR_12|PF13424.2|0.13,TPR_12|PF13424.2|0.023,TPR_12|PF13424.2|3.7e+02,TPR_12|PF13424.2|9.6e+03,TPR_1|PF00515.24|25,TPR_1|PF00515.24|0.2,TPR_1|PF00515.24|6.7,TPR_1|PF00515.24|7.6,TPR_1|PF00515.24|7.9e+02,TPR_1|PF00515.24|0.00018,TPR_1|PF00515.24|4.9e+02,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|7.7e+02,TPR_1|PF00515.24|4.9e+03,TPR_1|PF00515.24|3.9e+02,TPR_14|PF13428.2|5.4,TPR_14|PF13428.2|8.2e+02,TPR_14|PF13428.2|3.9,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|9.3e+03,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|5.3e+02,TPR_14|PF13428.2|24,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|7e+03,TPR_16|PF13432.2|1.3e+02,TPR_16|PF13432.2|2.9e+02,TPR_16|PF13432.2|1.7e+02,TPR_16|PF13432.2|0.14,TPR_16|PF13432.2|7.8e+03,TPR_16|PF13432.2|1.6e+04,TPR_16|PF13432.2|0.72,TPR_16|PF13432.2|3.4e+03,TPR_16|PF13432.2|0.0011,TPR_16|PF13432.2|6.3e+03,TPR_17|PF13431.2|9.7,TPR_17|PF13431.2|0.81,TPR_17|PF13431.2|3.6e+03,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.27,TPR_17|PF13431.2|7.4e+02,TPR_17|PF13431.2|5.5,TPR_17|PF13431.2|3.2e+02,TPR_8|PF13181.2|7.2e+02,TPR_8|PF13181.2|2e+02,TPR_8|PF13181.2|25,TPR_8|PF13181.2|7.4e+02,TPR_8|PF13181.2|5.8e+03,TPR_8|PF13181.2|0.0025,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|1e+03,TPR_8|PF13181.2|1.6e+03,TPR_8|PF13181.2|6.5e+03,TPR_8|PF13181.2|7.2e+03,TPR_19|PF14559.2|5.1e+02,TPR_19|PF14559.2|3.9e+03,TPR_19|PF14559.2|25,TPR_19|PF14559.2|1.8e+03,TPR_19|PF14559.2|7.9e+03,TPR_19|PF14559.2|7.5,TPR_19|PF14559.2|0.045,TPR_19|PF14559.2|1.2e+04,TPR_19|PF14559.2|3e+02,TPR_6|PF13174.2|1.6e+04,TPR_6|PF13174.2|1.6e+03,TPR_6|PF13174.2|11,TPR_6|PF13174.2|0.12,TPR_6|PF13174.2|1.1e+02,TPR_6|PF13174.2|2.6e+03 R_Transcript_74247:212-2872(+)
MTHKDKDDDDDVIMWNRLQEFVESHPEDPFHRFNLGRYLWERGDEWKEKATEHFLMAAKLNPQNGEAFRYLGHYYSSVDTQRALKCYHRAISLDSHDFHSGEALCNLLDKDGKESLEIAVCKEASTKSPRAFWASRRLGFLLVHQKKWSEAVQSLQHAIQGYPTCADLWEVRERDYLSFFLFTLIYYADLILLFITYVYSLFLSLGFRSCLPTTWHVYCCHQDASLDILSQWISCCLQSYGRAMELESSRNFAMVECGNIFLMLGLFRKGIEQFRHALQICSHSVSAQCGLASGLLAMSKESINLGAFGWSISLLEEASEIAKASTALAANMSCVWKLYADIQLTYGKCFPWTKGGNHKDEEGFSGSLKSWCKTRYSAAISANCSYQRALHLAPWQANIYMDVAVALDLIWSLEGCHEDDRGSWQLAEKMMLGSLSLEGENYEFWMALGSFSRIKALKQHAFIRGLQLDVSLASAWAYLGKLYREEGQTQLARQAFDKARSIDPSLALPWAGMSADIFTRNPQSDEAYDSCLRAVQIIPIAEFQIGLAKIALLSGHLLSSEVFAAIRQAVQCAPCYPESHNLSGLVSEARCDYESAVSSYQLARYALKASTSDLSHSHFADVSVNLARALCRAGNLHDAVKELEDLKKGGFLDVEGLQIYAISLWKLGNNDLALSASRDLAKLVPVIKQSSAAACICLVCAILYHLSGVGSAVNSILKTPRELLQVAKVSFLVSAVGAVDQSNQLQSVISSSRCSLSLHQEIVEMHLLIALSKAIRNAPGQNLHIQSGIDHLRKALHMYPNVNLLRNMLGYFLLSSKQWENGHVVKRCCAVVSLESSVKEDFRSAQEVIGAEGVACQAIVTPCRLASSLPTCKYQSMQGVSSMVIMQ

Click here to download the sequence:
Link to NCBI Protein BLAST