Transcript Information: R_Transcript_74248.p1


Annotated TAIR IDAT1G76630.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28759699-28765042 | Forward length=1168
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9774041034279
Replicate 21.3647595270594
Replicate 31.8325390076922
Condition 2: 8 Hour
Replicate 11.4691518968347
Replicate 21.1180440920593
Replicate 32.8740050148946
Condition 3: 24 Hour
Replicate 12.640147831186
Replicate 21.8379382408814
Replicate 32.4806065311817


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74248.p1 GENE.R_Transcript_74248~~R_Transcript_74248.p1 ORF type:3prime_partial len:600 (+),score=126.75,TPR_11|PF13414.2|0.47,TPR_11|PF13414.2|4.2e-05,TPR_11|PF13414.2|0.24,TPR_11|PF13414.2|3.8e-10,TPR_11|PF13414.2|0.77,TPR_11|PF13414.2|7.5e+02,TPR_11|PF13414.2|3.1e+03,TPR_11|PF13414.2|0.00044,TPR_11|PF13414.2|8.5,TPR_11|PF13414.2|0.38,TPR_2|PF07719.13|3,TPR_2|PF07719.13|1.5,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.00018,TPR_2|PF07719.13|6.9,TPR_2|PF07719.13|3.6e+03,TPR_2|PF07719.13|9.3e-05,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|76,TPR_2|PF07719.13|14,TPR_1|PF00515.24|16,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|7.6,TPR_1|PF00515.24|7.6e-05,TPR_1|PF00515.24|4.8,TPR_1|PF00515.24|5.1e+02,TPR_1|PF00515.24|0.00011,TPR_1|PF00515.24|3.2e+02,TPR_1|PF00515.24|8.8e+02,TPR_1|PF00515.24|4.9e+02,TPR_12|PF13424.2|0.063,TPR_12|PF13424.2|2.8e-06,TPR_12|PF13424.2|0.11,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|0.075,TPR_12|PF13424.2|0.014,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|27,TPR_8|PF13181.2|0.00013,TPR_8|PF13181.2|4.7e+02,TPR_8|PF13181.2|3.7e+03,TPR_8|PF13181.2|0.0015,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|6.6e+02,TPR_17|PF13431.2|6.1,TPR_17|PF13431.2|0.53,TPR_17|PF13431.2|2.3e+03,TPR_17|PF13431.2|0.21,TPR_17|PF13431.2|2e+02,TPR_17|PF13431.2|0.17,TPR_17|PF13431.2|4.7e+02,TPR_17|PF13431.2|3.4,TPR_14|PF13428.2|3.6,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|7.1e+03,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|0.0096,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|16,TPR_16|PF13432.2|81,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|1e+02,TPR_16|PF13432.2|0.081,TPR_16|PF13432.2|0.00012,TPR_16|PF13432.2|4.4,TPR_16|PF13432.2|1.2e+04,TPR_16|PF13432.2|0.44,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|4.7,TPR_7|PF13176.2|19,TPR_7|PF13176.2|4.5e+03,TPR_7|PF13176.2|0.0009,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|1.8e+02,TPR_7|PF13176.2|8.1,TPR_6|PF13174.2|8.6e+03,TPR_6|PF13174.2|1e+03,TPR_6|PF13174.2|8.3,TPR_6|PF13174.2|7.1,TPR_6|PF13174.2|0.078,TPR_6|PF13174.2|71,TPR_19|PF14559.2|2.3e+02,TPR_19|PF14559.2|2.5e+03,TPR_19|PF14559.2|9.9,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|5.1e+03,TPR_19|PF14559.2|4.6,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|0.03 R_Transcript_74248:141-1937(+)
ATGACGCACAAGGACAAGGACGATGATGATGATGTAATTATGTGGAATCGTTTACAAGAATTCGTAGAGTCTCATCCAGAAGACCCTTTCCATAGATTCAACCTCGGGAGATATTTGTGGGAAAGAGGGGACGAATGGAAGGAGAAAGCAACAGAGCACTTTTTGATGGCGGCAAAGTTGAATCCGCAAAATGGAGAAGCCTTCAGATACTTAGGTCATTACTACAGCAGTGTGGATACTCAAAGAGCTCTCAAATGCTATCATCGTGCTATCTCCCTCGACTCCCATGATTTCCACTCCGGGGAAGCATTGTGTAATTTGTTGGACAAAGACGGAAAGGAAAGCTTGGAGATTGCTGTGTGCAAGGAGGCCTCGACCAAGTCCCCTCGTGCCTTCTGGGCTTCTCGCAGATTAGGTTTCCTGCTGGTCCACCAAAAAAAGTGGTCTGAAGCTGTTCAGAGTCTTCAGCATGCTATCCGAGGCTATCCAACTTGTGCTGATCTCTGGGAAGCTTTAGGTCTTGCCTACCAACGACTTGGCATGTATACTGCTGCCATCAAGTCATATGGGCGAGCAATGGAGTTGGAAAGTTCAAGAAATTTTGCAATGGTTGAGTGTGGAAATATATTTCTAATGCTTGGTTTGTTTAGAAAGGGAATAGAGCAGTTTCGCCATGCTCTACAAATATGCTCTCATAGTGTATCTGCACAATGTGGGCTTGCTTCTGGGCTTCTTGCTATGTCAAAAGAATCCATCAACCTGGGTGCATTTGGATGGTCAATATCTCTGTTGGAGGAGGCATCTGAAATCGCAAAAGCAAGCACCGCTTTGGCTGCTAATATGTCGTGTGTGTGGAAGCTTTATGCTGATATTCAGCTTACATATGGCAAATGCTTTCCATGGACAAAAGGAGGGAATCACAAAGATGAAGAAGGCTTTTCCGGGTCACTAAAGTCCTGGTGCAAAACTCGCTATTCAGCTGCTATATCTGCCAATTGTTCTTATCAGCGCGCTTTGCATTTGGCACCATGGCAAGCAAATATCTATATGGATGTTGCTGTAGCATTGGATCTTATTTGGTCTTTAGAGGGCTGTCATGAAGATGATCGTGGCTCTTGGCAGCTCGCCGAGAAAATGATGCTGGGGAGCTTATCACTAGAAGGTGAAAATTATGAATTTTGGATGGCATTGGGAAGCTTTTCTCGAATTAAAGCATTGAAACAGCATGCCTTTATCCGGGGGTTACAGTTAGATGTCTCTCTAGCTTCTGCTTGGGCATATCTTGGGAAGCTATACAGAGAAGAGGGTCAAACTCAACTGGCTAGACAAGCATTTGATAAGGCTCGAAGTATAGATCCTTCTCTTGCATTGCCATGGGCAGGCATGTCAGCTGATATATTTACCAGGAATCCTCAATCAGATGAGGCCTATGACAGTTGCTTACGAGCTGTTCAAATAATACCTATTGCTGAGTTTCAGATTGGTTTGGCCAAAATTGCTCTGCTTTCCGGCCACCTTTTATCTTCAGAGGTTTTCGCAGCTATCAGGCAAGCTGTACAATGTGCGCCTTGCTATCCTGAATCTCATAATCTGAGTGGACTTGTTTCAGAGGCTCGTTGTGATTATGAGTCTGCTGTTTCATCCTATCAGCTAGCACGTTATGCTTTAAAGGCTTCTACATCTGATTTGTCACATTCTCATTTTGCTGATGTGTCAGTTAATTTGGCAAGGGCGCTTTGTAGGGCAGGGAATCTGCATGATGCTGTGAAAGAATTGGAAGATTTGAAGAAAGGAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74248.p1 GENE.R_Transcript_74248~~R_Transcript_74248.p1 ORF type:3prime_partial len:600 (+),score=126.75,TPR_11|PF13414.2|0.47,TPR_11|PF13414.2|4.2e-05,TPR_11|PF13414.2|0.24,TPR_11|PF13414.2|3.8e-10,TPR_11|PF13414.2|0.77,TPR_11|PF13414.2|7.5e+02,TPR_11|PF13414.2|3.1e+03,TPR_11|PF13414.2|0.00044,TPR_11|PF13414.2|8.5,TPR_11|PF13414.2|0.38,TPR_2|PF07719.13|3,TPR_2|PF07719.13|1.5,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.00018,TPR_2|PF07719.13|6.9,TPR_2|PF07719.13|3.6e+03,TPR_2|PF07719.13|9.3e-05,TPR_2|PF07719.13|3.9e+03,TPR_2|PF07719.13|76,TPR_2|PF07719.13|14,TPR_1|PF00515.24|16,TPR_1|PF00515.24|0.13,TPR_1|PF00515.24|7.6,TPR_1|PF00515.24|7.6e-05,TPR_1|PF00515.24|4.8,TPR_1|PF00515.24|5.1e+02,TPR_1|PF00515.24|0.00011,TPR_1|PF00515.24|3.2e+02,TPR_1|PF00515.24|8.8e+02,TPR_1|PF00515.24|4.9e+02,TPR_12|PF13424.2|0.063,TPR_12|PF13424.2|2.8e-06,TPR_12|PF13424.2|0.11,TPR_12|PF13424.2|4.2e+02,TPR_12|PF13424.2|0.075,TPR_12|PF13424.2|0.014,TPR_8|PF13181.2|4.5e+02,TPR_8|PF13181.2|1.2e+02,TPR_8|PF13181.2|27,TPR_8|PF13181.2|0.00013,TPR_8|PF13181.2|4.7e+02,TPR_8|PF13181.2|3.7e+03,TPR_8|PF13181.2|0.0015,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|6.6e+02,TPR_17|PF13431.2|6.1,TPR_17|PF13431.2|0.53,TPR_17|PF13431.2|2.3e+03,TPR_17|PF13431.2|0.21,TPR_17|PF13431.2|2e+02,TPR_17|PF13431.2|0.17,TPR_17|PF13431.2|4.7e+02,TPR_17|PF13431.2|3.4,TPR_14|PF13428.2|3.6,TPR_14|PF13428.2|5.6e+02,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|1.3,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|4.4e+03,TPR_14|PF13428.2|7.1e+03,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|0.0096,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|16,TPR_16|PF13432.2|81,TPR_16|PF13432.2|1.9e+02,TPR_16|PF13432.2|1e+02,TPR_16|PF13432.2|0.081,TPR_16|PF13432.2|0.00012,TPR_16|PF13432.2|4.4,TPR_16|PF13432.2|1.2e+04,TPR_16|PF13432.2|0.44,TPR_16|PF13432.2|1.9e+03,TPR_16|PF13432.2|4.7,TPR_7|PF13176.2|19,TPR_7|PF13176.2|4.5e+03,TPR_7|PF13176.2|0.0009,TPR_7|PF13176.2|3.6,TPR_7|PF13176.2|1.8e+02,TPR_7|PF13176.2|8.1,TPR_6|PF13174.2|8.6e+03,TPR_6|PF13174.2|1e+03,TPR_6|PF13174.2|8.3,TPR_6|PF13174.2|7.1,TPR_6|PF13174.2|0.078,TPR_6|PF13174.2|71,TPR_19|PF14559.2|2.3e+02,TPR_19|PF14559.2|2.5e+03,TPR_19|PF14559.2|9.9,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|5.1e+03,TPR_19|PF14559.2|4.6,TPR_19|PF14559.2|1.3e+04,TPR_19|PF14559.2|0.03 R_Transcript_74248:141-1937(+)
MTHKDKDDDDDVIMWNRLQEFVESHPEDPFHRFNLGRYLWERGDEWKEKATEHFLMAAKLNPQNGEAFRYLGHYYSSVDTQRALKCYHRAISLDSHDFHSGEALCNLLDKDGKESLEIAVCKEASTKSPRAFWASRRLGFLLVHQKKWSEAVQSLQHAIRGYPTCADLWEALGLAYQRLGMYTAAIKSYGRAMELESSRNFAMVECGNIFLMLGLFRKGIEQFRHALQICSHSVSAQCGLASGLLAMSKESINLGAFGWSISLLEEASEIAKASTALAANMSCVWKLYADIQLTYGKCFPWTKGGNHKDEEGFSGSLKSWCKTRYSAAISANCSYQRALHLAPWQANIYMDVAVALDLIWSLEGCHEDDRGSWQLAEKMMLGSLSLEGENYEFWMALGSFSRIKALKQHAFIRGLQLDVSLASAWAYLGKLYREEGQTQLARQAFDKARSIDPSLALPWAGMSADIFTRNPQSDEAYDSCLRAVQIIPIAEFQIGLAKIALLSGHLLSSEVFAAIRQAVQCAPCYPESHNLSGLVSEARCDYESAVSSYQLARYALKASTSDLSHSHFADVSVNLARALCRAGNLHDAVKELEDLKKGG

Click here to download the sequence:
Link to NCBI Protein BLAST