Transcript Information: R_Transcript_74347.p1


Annotated TAIR IDAT4G28740.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14201051-14202542 | Forward length=347
E-Value6.9E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.23259135675
Replicate 26.201984122968
Replicate 37.8235319174551
Condition 2: 8 Hour
Replicate 15.8012664644243
Replicate 27.2242849025369
Replicate 38.3776664401786
Condition 3: 24 Hour
Replicate 110.666550435026
Replicate 27.9398932006078
Replicate 39.3612029276269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74347.p1 GENE.R_Transcript_74347~~R_Transcript_74347.p1 ORF type:complete len:325 (+),score=74.08,DUF3493|PF11998.4|3.4e-27 R_Transcript_74347:159-1133(+)
ATGGCATCAGTGGTCCAATCTGCTCATTTTCTGAGATGGACAAGACCCAGTTTATGCCCAGAAAATGGCAGCTCAAGAATTTGCCCCCAGTTTGTTTTTGGCGGTCATATTTGGGTACCAACTTTAAGGCATGGAGCTAGACGAACTCGTTCTTCTCCTACTATCACCTGCTCTGCTGCCAATAAACCCTCCACTTCTTCGGATGTCAGTTCTACAGCTAAGATACGAAGTGAAGTTCTTTCTCCTTTCCGGTCCCTTCGAATGTTCTTTTACCTTGCTTTTATGGCAAGTGGTGGGCTGGGTGGACTAATAGCTTCCACACAACTGATTGGTGCTCTTGCAAATCCATCAAGAGCAGATCAAGTACCTGAGATACTCAAGGGTCTTGGAATAGATCTTGGTGCAGTTTCTGTATTTGCCTTTCTATATAGTAGAGACAACAAGGCTAAAAATGCACAAATAGCTAGGCTTGTCAGAGAAGAAACTCTTTCTAATCTTAAGGTTCGTATTGATGAGAAGACGACCATTCCTGTAAGCTCATTGAGGGGGATTGCTCGTCTTGTCATTCTTGCTGGTCCTTGCTCCTTCATCGCGGAGTCCTTTAAGCTTAGTGAGCCTTTCATGGAAGGCCTTTTGGAAAGAGGAGTGCTTGTGGTTCCATTTGCAACTGATGGGGAGTTGCCTGAGTTTAAGTTTGGGAAGAACCAAGATATGACTGTGACTAGCAAGAAAAGAAGCCGGCTTTGGCAGTTGGTTCCTTTCAATGTTTCTGAATGGTCCAAGTGGTTAGATGAACAGAAGAAGCTTGCAAATGTCTCTTCTGATTCTCCTGTGTATTTGTCCCTGCGCTTGGATGGGCGTGTTCGAGGCAGTGGAGTTGGTTATCCACCTTGGAATGCATTTGTCGCACAGCTACCGCCAGTAAAGGGCCTGTGGTCAGGTCTCTTAGATGGCATGGACGGAAGAGTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74347.p1 GENE.R_Transcript_74347~~R_Transcript_74347.p1 ORF type:complete len:325 (+),score=74.08,DUF3493|PF11998.4|3.4e-27 R_Transcript_74347:159-1133(+)
MASVVQSAHFLRWTRPSLCPENGSSRICPQFVFGGHIWVPTLRHGARRTRSSPTITCSAANKPSTSSDVSSTAKIRSEVLSPFRSLRMFFYLAFMASGGLGGLIASTQLIGALANPSRADQVPEILKGLGIDLGAVSVFAFLYSRDNKAKNAQIARLVREETLSNLKVRIDEKTTIPVSSLRGIARLVILAGPCSFIAESFKLSEPFMEGLLERGVLVVPFATDGELPEFKFGKNQDMTVTSKKRSRLWQLVPFNVSEWSKWLDEQKKLANVSSDSPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPPVKGLWSGLLDGMDGRVL*

Click here to download the sequence:
Link to NCBI Protein BLAST