Transcript Information: R_Transcript_74432.p1


Annotated TAIR IDAT1G54130.1
Annotated Gene NameRELA/SPOT Homolog 3
Annotated Gene Symbol(s)RSH3, AT-RSH3, ATRSH3
Annotation TypeHomolog
Chromosome Positionchr1:20211177-20213761 | Forward length=715
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.726527395361
Replicate 28.3791464175768
Replicate 39.5907102046175
Condition 2: 8 Hour
Replicate 16.9193043968571
Replicate 27.7889115525237
Replicate 38.8141038883309
Condition 3: 24 Hour
Replicate 17.9173983403501
Replicate 26.8175425405706
Replicate 38.0280162519416


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74432.p1 GENE.R_Transcript_74432~~R_Transcript_74432.p1 ORF type:complete len:867 (+),score=171.87,HD_4|PF13328.2|2.2e-45,RelA_SpoT|PF04607.13|1.2e-30,HD|PF01966.18|1.1e-06,TGS|PF02824.17|9.9e-06 R_Transcript_74432:242-2842(+)
ATGGTCTCAAATTCAACGAACACGAATTTCACGATGCTAGGGCAATCAATTTCCCCTTTTCGCCTTCTTCACCGCAATTTCCGTCGTACACGCCATACGGCCTCTAAATTCCGGTCCTTGATCCATCAAATTTCGCCCAATTTGGTGGTTTCTTCATCGCTTGGTCCTCTCTTCGCCTCTGCTGCCGCTGTCGGGTCCTCCTCTCACGCCGCTGTGGCCTCCACCATCACTCAGGTTGCCGTCACCGCCGTCGCAATTGCTTCTGGTGCTTGTCTTTCTACTAAGGTCGATTTCTTGTGTCCCAAACCCGATGAACAACCTAGTCCTTTCATACTGGATGGGGTGGATGTTACTGGCTATCCCATATTCAATGATCCCAAGGTGCAAAAGGCTATATCTTTTGCTAGGAAAGCTCATCATGGCCAGCTACGTAAAACTGGGGAGCCTTACCTGGCACATTGTCTTCATACTGGAAAAATCTTGGCTATATTAGTGCCACCAAGTGGACAGCGAGCTGTTGATACAGTTGTGGCTGGGATTCTTCATGATGTTGTTGATGATACAAGTGAAAGTCTTCTTAGTATAAGAGAAATGTTTGGTAATGATGTGTCACAGATGGTAGCTGGTGTTTCACGGTTAAGTTATATTAATCAGCTTTTGAGAAGAAACCGCAGAATAAGTGCAAACCAGAGTAGTATTCAACATGAAGAGGCAAATAATTTGCGAGTGATGCTTTTGGGCATGGTTGATGATCCACGTGTGGTACTCATAAAGCTGGCTGATCGCCTTCATAACATGAGAACCATTCATGCTTTGCCATTGTCCAAGGCTCAAGCTGTTGCCGAAGAAACTCTGGTTGTCTGGTGCTCCCTTGCCTCAAGATTGGGCCTGTGGGCCTTAAAGGCCGAACTAGAAGATCTGTGCTTTGCCGTTTTGCAGCCTCAAATGTTCTGTCAAATTAGAGCTGAGCTGGCTTCCATGTGGAGCCCTTTCAGAAGGGCAGGGAATCTTAAAAGAGCATCAGCAAAAAGCAGTTCGCTTTCAAGCTCCGATGCAATTGCTTCGAGTAGCTTTAACTGTTCTGTCACTATTGACAAAGATAATATAGATACAAAGGATCTTCTGGAAGCAGTCTTACCCTTTGAACTCTTGCTAGATCGGGAAAAACGAACGAACTTCCTCAGTAATCTGACAAGATATTCCAAGATTTCAACAAAACCAAAGGTTGTAAGGGATGCTGTAAGTGCTCTGGCGTCCTTAGCAGTTTGTGAGGAGGCACTTGAGCGTGAGCTTTTGATATCGACTTCCTATGTACCAGGGATGGAAGTTACCCTTTCCAGCCGACTGAAAAGCTTGTACAGCATATTCTGTAAGATGAAAAGAAAAGAAGTTGATATAAGTCAGGTATATGATGCCCGTGCATTGAGAATAGTCATTGGAGATAAGAATGGAATGCTGCGTGGACCTGCTGTCAGCTGTTGCTACAGTGTCCTTGATATTGTACATAGGCTCTGGCCGCCTATTGATGGTGAATTTGATGACTACATTGTTAACCCAAAGCCAAGTGGCTATCAGTCTTTGCATACTGCTGTACAAGGTCCTGATAATTCACCCTTGGAAGTTCAAATAAGGACACAGAGGATGCACGAATATGCTGAGCATGGGCTTGCTGCACATTGGCTTTATAAAGAGACAAATAACAATTCACTTTCTTCTACAAGCTTGGATGGCTCTCATGTTAAAGATTTCTCCAACTTTTCCCAAGGTTTGGAGGAGCAACACTCCATAGAAGAGGATATCTTTTGGAGGTATAGTTCCTTGAAAGCTGGACATCCATTACTTAGGGTGGAAAGAAGTAACTTGCTTGCTGCTGTTATTATCAGTGTAGATAAGGATGGGAAGGAACTACTTGTTGCTGTCAGCTTTGGATTAGCAGCATCTGAAGCAGTTGCTGACCGAAGAACTCCTTTTCAAATAAAGAGATGGGAAGCTTATGCTAGGTTATACAAAAAGGTTTTGGATGAAGGTTGGTTTGAACCAGGGCATGGAGATTGGTGTACTTGTCTTGAGAAGTACACACTTTGCAGAGATGGAATCTATCATAAGCAAGATCAATTTGGTCGTCTGCTGCCAACTTTTATGCAGATCATTGATCTGACAGAGGAGGAAGAATATAAATACTGGGCAGTGGTCTCTGCTGTTTTTGATGGAAAAGATGTTGATCCAATTCAATCTTGTCCTAGGAGCTGCGAGGAACCCATCAGTAGGGCATTCTCATCTTCCATGGAGGATAATATCAATAACAAGGTCCGCCTACTTAGGACAATGCTTCAATGGGAGGAGCAAATGTGTTCTGAAGTAGGCGTTAAACAAGGCTTCATATCAAGGAAATTGTGTGAAAGGCCTGATGCCTTGTTACTTGGGGAAGTAGCAGTAGTATTTTGGCCAGGTGGTCATATCATGAGGTTAAGAACTGGTAGTACTGCTGCAGATGCTGCAAGAAGAATAGGGCTGGAAGGCAAGTTGGTTTTGGTGAATGGTCAACTTATGCAACCCAATATTGAGCTCAAAGATGGTGATGTGGTTGAAGTGAGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74432.p1 GENE.R_Transcript_74432~~R_Transcript_74432.p1 ORF type:complete len:867 (+),score=171.87,HD_4|PF13328.2|2.2e-45,RelA_SpoT|PF04607.13|1.2e-30,HD|PF01966.18|1.1e-06,TGS|PF02824.17|9.9e-06 R_Transcript_74432:242-2842(+)
MVSNSTNTNFTMLGQSISPFRLLHRNFRRTRHTASKFRSLIHQISPNLVVSSSLGPLFASAAAVGSSSHAAVASTITQVAVTAVAIASGACLSTKVDFLCPKPDEQPSPFILDGVDVTGYPIFNDPKVQKAISFARKAHHGQLRKTGEPYLAHCLHTGKILAILVPPSGQRAVDTVVAGILHDVVDDTSESLLSIREMFGNDVSQMVAGVSRLSYINQLLRRNRRISANQSSIQHEEANNLRVMLLGMVDDPRVVLIKLADRLHNMRTIHALPLSKAQAVAEETLVVWCSLASRLGLWALKAELEDLCFAVLQPQMFCQIRAELASMWSPFRRAGNLKRASAKSSSLSSSDAIASSSFNCSVTIDKDNIDTKDLLEAVLPFELLLDREKRTNFLSNLTRYSKISTKPKVVRDAVSALASLAVCEEALERELLISTSYVPGMEVTLSSRLKSLYSIFCKMKRKEVDISQVYDARALRIVIGDKNGMLRGPAVSCCYSVLDIVHRLWPPIDGEFDDYIVNPKPSGYQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETNNNSLSSTSLDGSHVKDFSNFSQGLEEQHSIEEDIFWRYSSLKAGHPLLRVERSNLLAAVIISVDKDGKELLVAVSFGLAASEAVADRRTPFQIKRWEAYARLYKKVLDEGWFEPGHGDWCTCLEKYTLCRDGIYHKQDQFGRLLPTFMQIIDLTEEEEYKYWAVVSAVFDGKDVDPIQSCPRSCEEPISRAFSSSMEDNINNKVRLLRTMLQWEEQMCSEVGVKQGFISRKLCERPDALLLGEVAVVFWPGGHIMRLRTGSTAADAARRIGLEGKLVLVNGQLMQPNIELKDGDVVEVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST