Transcript Information: R_Transcript_74646.p1


Annotated TAIR IDAT1G04240.1
Annotated Gene NameAUX/IAA transcriptional regulator family protein
Annotated Gene Symbol(s)SHY2, IAA3
Annotation TypeHomolog
Chromosome Positionchr1:1128564-1129319 | Reverse length=189
E-Value3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4612251167146
Replicate 27.8039346680046
Replicate 38.5140086640567
Condition 2: 8 Hour
Replicate 112.676310614282
Replicate 212.961396111484
Replicate 311.806578589367
Condition 3: 24 Hour
Replicate 18.8377399504879
Replicate 211.515577650832
Replicate 36.4888328054076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74646.p1 GENE.R_Transcript_74646~~R_Transcript_74646.p1 ORF type:5prime_partial len:226 (+),score=38.26,AUX_IAA|PF02309.12|9.1e-28,AUX_IAA|PF02309.12|7.4e-23 R_Transcript_74646:1-678(+)
TATTATTATCTCTTCTTCTATATATTAATTCCTCTCTTCTTGCCATTTATCCTTCAATATTGCAATTTGCAAGCAATTGTATTACTCTTCTTTCAAATCATCTACAAATTAATAAATACCAAGCATATCAAAGAAACAACATACAAAATCATGGAACTTAACAAGAAAGTGCTGAATTACCATGAGGATACTGAGTTGAGATTAGGCTTGCCAGGAAGAAATGAGGTCGACAAGCAATCAACTACTACAAGGGCAAATAAAAGAGGTTTCTCTAGCATTATCAACGATGAGAATACTCCTTTTGGTACAAGAAAATGCCATGACGATGTAGCACCACCAACAAAGGCACAAGCAATTGGGTGGCCTCCAGTCAAGTCTTACAGGAAAAATTGCCTTCAAGCAACAAAACTACAAGAGGAAACTAGTACAAGCATCTATGTAAAAGTTAGTATGGATGGTGCTCCTTATCTTAGAAAGATTGACCTAAGACTTTACAAAAGTTACAAGGAGTTTCTTAAGGCATTGGAAGGAATGTTCAAAGTGAAAGATTGTGAGTATGAACCAACTTATGAAGACAAAGATGGAGATTGGATGTTGGTAGGAGATGTGCCTTGGGAAATGTTCATTGGCTCATGCAAGAGGCTTAGGATAATGAAGGGCTTAGATTGTTTGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74646.p1 GENE.R_Transcript_74646~~R_Transcript_74646.p1 ORF type:5prime_partial len:226 (+),score=38.26,AUX_IAA|PF02309.12|9.1e-28,AUX_IAA|PF02309.12|7.4e-23 R_Transcript_74646:1-678(+)
YYYLFFYILIPLFLPFILQYCNLQAIVLLFFQIIYKLINTKHIKETTYKIMELNKKVLNYHEDTELRLGLPGRNEVDKQSTTTRANKRGFSSIINDENTPFGTRKCHDDVAPPTKAQAIGWPPVKSYRKNCLQATKLQEETSTSIYVKVSMDGAPYLRKIDLRLYKSYKEFLKALEGMFKVKDCEYEPTYEDKDGDWMLVGDVPWEMFIGSCKRLRIMKGLDCLA*

Click here to download the sequence:
Link to NCBI Protein BLAST