Transcript Information: R_Transcript_74838.p2


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value3.7E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.012546543122
Replicate 29.5808361122913
Replicate 310.897380021471
Condition 2: 8 Hour
Replicate 15.5865808374783
Replicate 26.9470700865819
Replicate 35.9036791823589
Condition 3: 24 Hour
Replicate 15.3493919753874
Replicate 25.3532181773246
Replicate 36.0563066366658


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74838.p2 GENE.R_Transcript_74838~~R_Transcript_74838.p2 ORF type:complete len:206 (+),score=46.17,Vps4_C|PF09336.6|6e-18 R_Transcript_74838:1259-1876(+)
ATGAAAGAAAATTGTTCTTATGTTTTATGTCTCCAGGGTGTTGGACACTATGATGAAAAAGTTCTTGTTCTTGCTGCAACAAACACTCCGTATGCTCTAGATCAGGCTATTCGACGAAGTTTTGATAAGCGTATTTATATCCCTCTACCTGATCTGAAAGCTCGGCAGCATATGTTCAAGGTTCATCTTGGGGATACACCACACAACTTGACCGAAAGTGACTTTGAATTCTTAGCTCGTAAAACAGAGGGCTTCTCGGGTTCAGATATATCTGTTTGTGTCAAGGATGTACTTTTTGAACCTGCTCGGAAAACCCAAGATGCCTTGTTCTTCTATAAGACAAAAGATGATGTGTGGGTGCCCTGTGGACCAAGACAGCCAGGTGCTGTGCAAATTACCATGCAGGAGCTTGCAACAAAGGGACTTGCTGCTAAGATTGTTCCACCCCCAATAACAAAAACTGATTTTGAGAAAGTAGTATCAAGGCAGAGGCCAACTGTGAGCAAAGCAGACCTTGGTGTATACGAGAGATACAGGAGTTTGGAGAAAAAGGCTGATGATTATTCAGATGGAAGACTGTCGTGTCAGGTTGCAACCAAACTTTGTAATTTAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74838.p2 GENE.R_Transcript_74838~~R_Transcript_74838.p2 ORF type:complete len:206 (+),score=46.17,Vps4_C|PF09336.6|6e-18 R_Transcript_74838:1259-1876(+)
MKENCSYVLCLQGVGHYDEKVLVLAATNTPYALDQAIRRSFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEFLARKTEGFSGSDISVCVKDVLFEPARKTQDALFFYKTKDDVWVPCGPRQPGAVQITMQELATKGLAAKIVPPPITKTDFEKVVSRQRPTVSKADLGVYERYRSLEKKADDYSDGRLSCQVATKLCNLI*

Click here to download the sequence:
Link to NCBI Protein BLAST