Transcript Information: R_Transcript_74843.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeOrtholog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value2.1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.851454412297
Replicate 230.478500604304
Replicate 330.049698782049
Condition 2: 8 Hour
Replicate 137.650308467269
Replicate 243.76000532361
Replicate 334.546613761382
Condition 3: 24 Hour
Replicate 135.300714339373
Replicate 230.592778461123
Replicate 330.595716228996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_74843.p1 GENE.R_Transcript_74843~~R_Transcript_74843.p1 ORF type:5prime_partial len:93 (+),score=24.13,Vps4_C|PF09336.6|3.5e-24 R_Transcript_74843:1-279(+)
AAGGATGTACTTTTTGAACCTGTTAGGAAAACCCAAGACGCCATGTTCTTCAACAAGACTAAAGATGATGTGTGGGTGCCCTGTGGACCAAGACAGCCAGGTGCTGTGCAAATTACCATGCAGGAGCTTGCAACAAAGGGACTTGCTGCTAAGATTGTTCCACCCCCAATAACAAGAACTGATTTTGAGAAAGTACTATCAAGGCAGAGGCCAACTGTAAGCAAATCAGACCTTGATGTACACGAGAGATTCACACAGGAGTTCGGAGAAGAAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_74843.p1 GENE.R_Transcript_74843~~R_Transcript_74843.p1 ORF type:5prime_partial len:93 (+),score=24.13,Vps4_C|PF09336.6|3.5e-24 R_Transcript_74843:1-279(+)
KDVLFEPVRKTQDAMFFNKTKDDVWVPCGPRQPGAVQITMQELATKGLAAKIVPPPITRTDFEKVLSRQRPTVSKSDLDVHERFTQEFGEEG*

Click here to download the sequence:
Link to NCBI Protein BLAST