Transcript Information: R_Transcript_75068.p1


Annotated TAIR IDAT3G27120.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10000248-10003265 | Reverse length=476
E-Value6.8E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2731480871951
Replicate 23.2562921485697
Replicate 32.9234770114637
Condition 2: 8 Hour
Replicate 13.7183704443313
Replicate 23.6124203297553
Replicate 35.6595490302661
Condition 3: 24 Hour
Replicate 15.1182187357402
Replicate 23.8837208708771
Replicate 35.0210889588682


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75068.p1 GENE.R_Transcript_75068~~R_Transcript_75068.p1 ORF type:5prime_partial len:619 (+),score=137.31,AAA|PF00004.25|1.4e-38,Vps4_C|PF09336.6|1.6e+04,Vps4_C|PF09336.6|3.2e-08 R_Transcript_75068:3-1859(+)
CTTCGCAAGTTCTTAGTCTTCCGTCTCATCGGTTTCCTCGATTCTCGCTCTCAAAACGACGTCGATGAGGCCTTCGTTCAACCTATTCGTCGCGATGCTTTGTCTAAACTTGATTCCTCTCGCCGTGCCCTCGCTCCTGATTCCGACCGGCAAGCGTTTGAGGCGGCAGGCAGAGATCCTGGAAAAGTTTTCTCCATGGACGTAGATATTGACAGGATTAAACAGTCAAAGTATTTTTGTGCACTTCTTCAGCAATCTCAGAAGGAGAATGTGGGTGGATTGGCTGGCCAAGAGGATGGGCTGGGCAAAATGACCAGGAAAACCTTCAAACCTACCAGTGATACAGATTTGTCATCCTGGCATGGGAACAATATGAAGGGCAGGAATAATATCCTTGAAAAAGGATCGCTCTTGCCCAAAAATAGTGGTCTTGGTGACTGTACCATTTTGGAGAAGACGCATGCAGGAAGCAATCATTCCAAAGGCCATTTCATCTCTGCACACTCTGAAGAAGAAAGAATACTGGGAAATAATCAAGGAGTAAAGCGTCAATACATGGAAACAAGGAGTCCCAGAAATGATTGTGCCAAGTCACCTTTGAACAGTGAAGAAACCAATGGAGAAGTTTCTGGAAATGGATTTGTTACTGCGAGAGCAAAATTGGAAATGGATGCAAAGCAAAAGCGAGGTTTTGGGGGTCCATCAAGTGCTTCTGTCTCCCCCCTCAGTGATTACAACTCCAACAGCAGGGCTTATGGTGGGAAATCATATGGTCTATCACGCCGTGGGGTCCGTGGCAACTTTGTTCCTCCAATTAGATCCAATGGCAGCAACACAGGGAATTTGACAGCACGAAGTGGAGGCAAATGTGATGATGCTATGGATGATTCAATCAAGAGATGTTTGGACATGCTATGTGGTCCTGATGGAGAGCTTCCTGAGAAGCTAAGAAATTTGGAGCCTCGTCTTATTGAACATGTTAGCAATGAAATCATGGATCGAGATCCCAATGTTCGTTGGGATGACATTGCTGGTTTGGAACATGCGAAGAAATGTGTCACGGAGATGGTAGTATGGCCTCTTTTGCGCCCTGACATTTTCAAAGGATGCCGCGCACCAGGGAGAGGTCTTCTCTTGTTTGGTCCACCTGGAACTGGTAAAACGATGATAGGGAAAGCTATAGCCGGAGAAGCTAAGGCGACCTTTTTCTACATATCTGCCAGTTCATTGACTAGCAAATGGATTGGTGAGGGTGAAAAGCTAGTGAGGGCCCTTTTTGGAGTAGCTAGTTGCCGTCAGCCTGCTGTGATTTTTGTTGATGAAATTGATTCCCTTCTCTCTCAGCGCAAATCAGAAGGGGAGCATGAAGCAAGTAGGAGACTGAAGACACAGTTCCTTATTGAGATGGAAGGATTTGACTCTGGAAGTGAGCAGATACTACTAATAGGAGCCACAAATAGGCCCCAGGAACTTGATGAAGCAGCAAGGAGACGACTTACAAAGCGGTTATATATCCCCCTCCCTTCACCAGAGGCAAGAGCGTGGATTGTCCGTAATCTCTTGGAGAAAGATGGACTGTTTAAGCTCTCGAAGGAGGATATGGACAAAATCTGCAAGTTGACCGAAGGATACTCAGGTTCGGACATGAAAAATCTAGTGAAGGATGCTTCCATGGGCCCACTGAGAGATGCTCTGAGGCAGGGAATTGAAATCACAAAGCTAAACAAGGAGGATATGAGACCAGTAACTGTCCAGGATTTTAGAGATGCATTACAGGAGGTGAGGCCTTCGGTTTCACCAAATGAGCTCGGTACATACGAGGATTGGAACAAACAATTTGGGAGCTTATCACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75068.p1 GENE.R_Transcript_75068~~R_Transcript_75068.p1 ORF type:5prime_partial len:619 (+),score=137.31,AAA|PF00004.25|1.4e-38,Vps4_C|PF09336.6|1.6e+04,Vps4_C|PF09336.6|3.2e-08 R_Transcript_75068:3-1859(+)
LRKFLVFRLIGFLDSRSQNDVDEAFVQPIRRDALSKLDSSRRALAPDSDRQAFEAAGRDPGKVFSMDVDIDRIKQSKYFCALLQQSQKENVGGLAGQEDGLGKMTRKTFKPTSDTDLSSWHGNNMKGRNNILEKGSLLPKNSGLGDCTILEKTHAGSNHSKGHFISAHSEEERILGNNQGVKRQYMETRSPRNDCAKSPLNSEETNGEVSGNGFVTARAKLEMDAKQKRGFGGPSSASVSPLSDYNSNSRAYGGKSYGLSRRGVRGNFVPPIRSNGSNTGNLTARSGGKCDDAMDDSIKRCLDMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVVWPLLRPDIFKGCRAPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHEASRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSPEARAWIVRNLLEKDGLFKLSKEDMDKICKLTEGYSGSDMKNLVKDASMGPLRDALRQGIEITKLNKEDMRPVTVQDFRDALQEVRPSVSPNELGTYEDWNKQFGSLSL*

Click here to download the sequence:
Link to NCBI Protein BLAST