Transcript Information: R_Transcript_7531.p1


Annotated TAIR IDAT4G16143.1
Annotated Gene Nameimportin alpha isoform 2
Annotated Gene Symbol(s)IMPA-2
Annotation TypeOrtholog
Chromosome Positionchr4:9134450-9137134 | Reverse length=535
E-Value8.2e-316
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 192.284523262684
Replicate 265.491253626256
Replicate 384.37528298918
Condition 2: 8 Hour
Replicate 148.47015724194
Replicate 261.919238915909
Replicate 381.901960024577
Condition 3: 24 Hour
Replicate 192.344252536016
Replicate 281.649636265303
Replicate 393.297869698898


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7531.p1 GENE.R_Transcript_7531~~R_Transcript_7531.p1 ORF type:complete len:537 (+),score=139.49,Arm|PF00514.19|3.3e-11,Arm|PF00514.19|1.7e-14,Arm|PF00514.19|1.6e-05,Arm|PF00514.19|1.4e-06,Arm|PF00514.19|7e-08,Arm|PF00514.19|2.9e-10,Arm|PF00514.19|2.2e-12,Arm|PF00514.19|2.1e-06,HEAT_EZ|PF13513.2|4.2e+02,HEAT_EZ|PF13513.2|4e-10,HEAT_EZ|PF13513.2|9.5e+03,HEAT_EZ|PF13513.2|0.019,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|7.1e-05,HEAT_EZ|PF13513.2|8.4,HEAT_2|PF13646.2|0.44,HEAT_2|PF13646.2|4.5e-09,HEAT_2|PF13646.2|0.19,HEAT_2|PF13646.2|3.3e+02,HEAT_2|PF13646.2|0.0086,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|6.6e+02,Arm_3|PF16186.1|1.8e-20,IBB|PF01749.16|1.1e-18,HEAT|PF02985.18|2.7,HEAT|PF02985.18|6.8e-06,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|52,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|0.57,HEAT|PF02985.18|4.3e+02,HEAT|PF02985.18|1.6e+03,Arm_2|PF04826.9|0.067,Arm_2|PF04826.9|4e+03,Arm_2|PF04826.9|0.0016,Arm_2|PF04826.9|3e+02,Atx10homo_assoc|PF09759.5|55,Atx10homo_assoc|PF09759.5|0.43,Atx10homo_assoc|PF09759.5|0.18 R_Transcript_7531:167-1777(+)
ATGTCGTTGAGGCCAAACGCGAGAACGGAGGTGAGGAGGAGCAAGTACAAGGTTGCAGTAGATGCCGATGAAGGGAGAAGAAGGAGAGAAGATAATTTGGTGGAGATTCGTAAGAATCGTCGTGAAGAAGGCCTCCAAAAGAAACGTCGTGAAGGCCTTCAGTCTGCTGCTATTTCTCAGCAATTCGCTTCTCATTCTACTCCTGGTTCCAGTGGTGCTTTCGATAAGAAGATTGATAGTTTGCCGCAGTTGGTTTCTGGTGTGTATATGGAAGACCGTGCTGCTCAACTCGAGGCCACTACTCACTTTCGGAAGTTGCTCTCTATAGAGCGCAATCCTCCCATAGAAGAGGTTGTTCAGTCCGGGGTTGTTCCTCGCCTTGTTGAATTTTTGGGTAGAGATGATTTCCCACAGCTTCAGTTTGAGGCTGCATGGGCCCTTACAAATATCGCTTCTGGTACATCAGAGAACACCAAGGTCGTCATTGATCATGGAGCTGTCCCTATTTTCGTAAAGCTCCTTTCTTCACCCAGTGATGATGTTCGTGAGCAGGCTGTTTGGGCATTGGGAAACATTGCTGGTGACTCACCTAAATGCCGTGACCTAGTCCTTGCACAAGGTGCTCTAATGCCATTGCTGGCCCAATTCAATGAGCAAGCAAAATTGTCCATGCTGAGAAATGCCACGTGGACTTTGTCGAACTTCTGCAGAGGCAAGCCACAGCCCTCTTTTGACCAGACGAGGCCTGCTCTTCCAACTCTGGAGCGGCTTATCCACTCAAATGACGAAGAAATTCTCACAGATGCTTGTTGGGCGTTGTCATATCTTTCTGATGGTACCAATGACAAGATCCAGGCTGTCATTGAAGCTGGCGTCTGCCCTCGACTTGTGGAGCTTTTGCTCCATTATTCTCCATCTGTCCTCATTCCTGCTCTCCGTACAGTTGGAAATATTGTCACCGGTGATGACATGCAGACTCAGTGTATTATAGAACATCAGGCACTTCCTTGTCTTCTAAATTTGCTTACGCAAAATCACAAGAAGAGTATAAGAAAAGAAGCTTGCTGGACCATTTCGAACATCACCGCTGGGACTAAGGAGCAAATACAGGCTGTCATTGAGGCTGGTATTATTGGCCCTCTTGTCAATCTACTCCAAAACGCCGAGTTTGATATTAAGAAGGAAGCTGCTTGGGCTATATCAAATGCAACTTCAGGAGGTTCACATGACCAAATAAAGTTTTTGGTTAGCCAGGGATGCATAAAGCCACTGTGTGATCTTCTGGTTTGTCCTGATCCAAGGATTGTCACTGTCTGCTTGGAAGGTCTTGAAAATATATTGAAGGTTGGGGAAGCTGAAAAGAACCTGGGCACCACTGGAAGTGTCAACGCTTACGCACAGATGCTTGAAGAAGCTGATGGTTTGGAGAAGATAGAGAGTCTGCAGAGTCATGATAACAGTGAGATATATGAGAAGTCCGTAAAGATTTTGGAAACCTATTGGCTCGAAGAGGATGATGAGGCATTGCCTTCAGCTGATGCTCCTCAGAATGGGTTTCAGTTTGGAGGCAGTGAAGTGAACATCCCCCAAGGTGGCTTTAACTTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7531.p1 GENE.R_Transcript_7531~~R_Transcript_7531.p1 ORF type:complete len:537 (+),score=139.49,Arm|PF00514.19|3.3e-11,Arm|PF00514.19|1.7e-14,Arm|PF00514.19|1.6e-05,Arm|PF00514.19|1.4e-06,Arm|PF00514.19|7e-08,Arm|PF00514.19|2.9e-10,Arm|PF00514.19|2.2e-12,Arm|PF00514.19|2.1e-06,HEAT_EZ|PF13513.2|4.2e+02,HEAT_EZ|PF13513.2|4e-10,HEAT_EZ|PF13513.2|9.5e+03,HEAT_EZ|PF13513.2|0.019,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|7.1e-05,HEAT_EZ|PF13513.2|8.4,HEAT_2|PF13646.2|0.44,HEAT_2|PF13646.2|4.5e-09,HEAT_2|PF13646.2|0.19,HEAT_2|PF13646.2|3.3e+02,HEAT_2|PF13646.2|0.0086,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|6.6e+02,Arm_3|PF16186.1|1.8e-20,IBB|PF01749.16|1.1e-18,HEAT|PF02985.18|2.7,HEAT|PF02985.18|6.8e-06,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|52,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|0.57,HEAT|PF02985.18|4.3e+02,HEAT|PF02985.18|1.6e+03,Arm_2|PF04826.9|0.067,Arm_2|PF04826.9|4e+03,Arm_2|PF04826.9|0.0016,Arm_2|PF04826.9|3e+02,Atx10homo_assoc|PF09759.5|55,Atx10homo_assoc|PF09759.5|0.43,Atx10homo_assoc|PF09759.5|0.18 R_Transcript_7531:167-1777(+)
MSLRPNARTEVRRSKYKVAVDADEGRRRREDNLVEIRKNRREEGLQKKRREGLQSAAISQQFASHSTPGSSGAFDKKIDSLPQLVSGVYMEDRAAQLEATTHFRKLLSIERNPPIEEVVQSGVVPRLVEFLGRDDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNIAGDSPKCRDLVLAQGALMPLLAQFNEQAKLSMLRNATWTLSNFCRGKPQPSFDQTRPALPTLERLIHSNDEEILTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHYSPSVLIPALRTVGNIVTGDDMQTQCIIEHQALPCLLNLLTQNHKKSIRKEACWTISNITAGTKEQIQAVIEAGIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGTTGSVNAYAQMLEEADGLEKIESLQSHDNSEIYEKSVKILETYWLEEDDEALPSADAPQNGFQFGGSEVNIPQGGFNFG*

Click here to download the sequence:
Link to NCBI Protein BLAST