Transcript Information: R_Transcript_75397.p1


Annotated TAIR IDAT5G40250.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16086056-16087186 | Forward length=376
E-Value1.4E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.156892739168
Replicate 212.432019983334
Replicate 314.708536772266
Condition 2: 8 Hour
Replicate 113.660535181095
Replicate 216.358750399604
Replicate 323.740395995611
Condition 3: 24 Hour
Replicate 119.091229168301
Replicate 218.921090521916
Replicate 319.353338881046


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75397.p1 GENE.R_Transcript_75397~~R_Transcript_75397.p1 ORF type:complete len:380 (+),score=81.84,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|5.4e-10,zf-rbx1|PF12678.3|3.8e+03,zf-rbx1|PF12678.3|1.5e-08,zf-C3HC4|PF00097.21|3.8e-06,zf-ANAPC11|PF12861.3|1.6e-05 R_Transcript_75397:988-2127(+)
ATGTCATTAGTTCATTCTCAAATCAGGAAAATTGATGGTGGTTTTTCATGGTCATCTTCAACAAGTCACCATAATTTCTTTCAAAGAGACACAAGCCCACAAACACCACCATCACCACCAACTTCAACTTCATCTGGTGGTAAAATTAGTCCTGCAATATTGTTCATTATAATTATATTGGCAGTTATATTTTTCATATCTGGTCTTCTACACTTGCTTGTTAGATTCCTTATAAAGCAAAGATCTTCCTCATCTTTTTCTCAATCTAATAGATACCCAGATAATATCTCAAGTTCAGATGCTATTCAAAGGCAATTGCAACAGCTTTTCCATCTTCATGATTCAGGTTTAGACCAAGCCTTCATTGATGCACTTCCTGTGTTTCAGTACAAGGAAATTGTGGGTTTAAAAGAGCCATTTGATTGTGCTGTATGTTTGTGTGAGTTCTCAGAACAGGATAAGTTAAGGTTACTGCCTTTGTGTAGTCATGCTTTTCATATTGATTGTATTGACACTTGGTTGCTCTCAAATTCAACTTGCCCTCTTTGTAGGGGTGCCCTTTACACCCCAGGGCTTGTTGTCGAAAACCCGGTTTTCGATTTTGAGGATTTGAGGGATCATGAGGATGGTATTGGGATTGGTCAAAAGCCAGTTGAGATTCAGATTGGTTCTGAAAAGAGGGTGTTCCCTGTGATACTTGGCAAGTTTAGGAGCACTAGCAATGAATCACAAGAAACAAGTGGGGATCATAAGGAAAAAGATATTGGTGAAACTAGTAGTAGTAGTTTGGATGCAAGAAGGTGTTTCTCAATGGGTTCATATCAATATGTTGTTGCTGATTCAACTTTGCAAGTTGCTTTGTGTCCTAAAAGACCTTCCAATGGAGGTAATGGTGGTGGTGAATTGAAGATTTTGAGAGGAGGGATAGAAGGGCAAAATGGGAATTCTACTACCGCTACTAATATCGGGGATGCTGAGGCTAGAAAGATTAATGTTGGGACTAAAAATGAGAGCCTATCTGTTTCTAAGATATGGTTATGGTCTAAAAAGGGCAGATTTCCAAATTCTTCAAATACAGATTTTAGTGGTATTCCTGTTGATATGAGTTTGCCTTGGACTAATAGAACTCAAGCTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75397.p1 GENE.R_Transcript_75397~~R_Transcript_75397.p1 ORF type:complete len:380 (+),score=81.84,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|5.4e-10,zf-rbx1|PF12678.3|3.8e+03,zf-rbx1|PF12678.3|1.5e-08,zf-C3HC4|PF00097.21|3.8e-06,zf-ANAPC11|PF12861.3|1.6e-05 R_Transcript_75397:988-2127(+)
MSLVHSQIRKIDGGFSWSSSTSHHNFFQRDTSPQTPPSPPTSTSSGGKISPAILFIIIILAVIFFISGLLHLLVRFLIKQRSSSSFSQSNRYPDNISSSDAIQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEQDKLRLLPLCSHAFHIDCIDTWLLSNSTCPLCRGALYTPGLVVENPVFDFEDLRDHEDGIGIGQKPVEIQIGSEKRVFPVILGKFRSTSNESQETSGDHKEKDIGETSSSSLDARRCFSMGSYQYVVADSTLQVALCPKRPSNGGNGGGELKILRGGIEGQNGNSTTATNIGDAEARKINVGTKNESLSVSKIWLWSKKGRFPNSSNTDFSGIPVDMSLPWTNRTQAT*

Click here to download the sequence:
Link to NCBI Protein BLAST