Transcript Information: R_Transcript_75438.p1


Annotated TAIR IDAT5G45310.1
Annotated Gene Nameunknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: stem, inflorescence meristem, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18359373-18360796 | Reverse length=352
E-Value3.2E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3442107221571
Replicate 25.8656331321722
Replicate 37.1992603873622
Condition 2: 8 Hour
Replicate 16.1408994629599
Replicate 28.5894181040745
Replicate 39.5656106761404
Condition 3: 24 Hour
Replicate 18.1627759031837
Replicate 26.7216027095093
Replicate 38.6161123211913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75438.p1 GENE.R_Transcript_75438~~R_Transcript_75438.p1 ORF type:complete len:315 (+),score=44.12,zf-C4H2|PF10146.5|9.5e-06 R_Transcript_75438:1544-2488(+)
ATGTTGAGGACCTTTTGGCTGGTGGTCACTACCTGTATGCAGCTTGTGCGAGCAATAGTTAACTGGCACACCAATATGTGTTGGCTATTTATTGTATGGACAGTCAACTTGACTACACTCCCTGTACGAGCCTTAACTGCGCTACAGAGGGAGAAATGGATGGACAGGCTTCTGCACGAAATGCGGAGTGAAATGGAGAACCTTACATGGGATAAGAAAGAGCTGCAGTCACATCTGCAGATGGCTATCAAAGAACATCATCTAATGGAGTCAATGTTAGCTGAAATAGAAGAGGATCATGACAAAGCTATATTGAAAATTGAAGAACTGGAGGAAGAGGTTCAGCATCTTAAAGATGAGAATCTAAAACTGAGGGAAGTCCAGAGTAAAGGGCTCTGGGATCCAGCTAGCAAAAGCAACACAGGAGATGACAGTCCCCATGGAATAACCTGGCAAACCAGTGGAAACGGAAGTGGCAAACTCCTGGAAGGTCTTCTGATGCATAAAAGTTCATGGTCTCATCAGCAAGTGTCGCCCCCCACCGGGCTCGTGGACCCCCTCACACCACTGATCTTCTATAGCGATGTTGATACAGACGCAGCTCTTGATCAAAGGAGGGAGGTTGCGTTTTCCCAGAGTGTTTTCAGCGCCCTGTTATCGCTCTTGGTTGGGATGATAATCTGGCAAGCTGAAGATCCTTGCATGCCACTTGTGATGGCTCTATTCACTGTGGTCGGTCTGTCATTAAGAAGCGTAGTGCAATTCTTCTCAACAATCAAAAACAGGCCAGCTTCTGATGCGGTTGCCCTGTTAAGCTTCAACTGGTTCATCCTTGGAACTCTCACTTATCCAACATTGCCTAGGGTTGCCCGAATGCTATCCCCCGTCTTCATGATGTTTGTGGATCAGACTCTAAGCTGGCTAGGATTAAGCTCCTTGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75438.p1 GENE.R_Transcript_75438~~R_Transcript_75438.p1 ORF type:complete len:315 (+),score=44.12,zf-C4H2|PF10146.5|9.5e-06 R_Transcript_75438:1544-2488(+)
MLRTFWLVVTTCMQLVRAIVNWHTNMCWLFIVWTVNLTTLPVRALTALQREKWMDRLLHEMRSEMENLTWDKKELQSHLQMAIKEHHLMESMLAEIEEDHDKAILKIEELEEEVQHLKDENLKLREVQSKGLWDPASKSNTGDDSPHGITWQTSGNGSGKLLEGLLMHKSSWSHQQVSPPTGLVDPLTPLIFYSDVDTDAALDQRREVAFSQSVFSALLSLLVGMIIWQAEDPCMPLVMALFTVVGLSLRSVVQFFSTIKNRPASDAVALLSFNWFILGTLTYPTLPRVARMLSPVFMMFVDQTLSWLGLSSLH*

Click here to download the sequence:
Link to NCBI Protein BLAST