Transcript Information: R_Transcript_75467.p1


Annotated TAIR IDAT4G37270.1
Annotated Gene Nameheavy metal atpase 1
Annotated Gene Symbol(s)HMA1, ATHMA1
Annotation TypeOrtholog
Chromosome Positionchr4:17541987-17546352 | Reverse length=819
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.589181558552
Replicate 27.1269493476567
Replicate 39.0340369274203
Condition 2: 8 Hour
Replicate 17.8629822724365
Replicate 29.6924457309168
Replicate 312.433520827884
Condition 3: 24 Hour
Replicate 110.93228915605
Replicate 27.5133299517351
Replicate 310.663240744899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75467.p1 GENE.R_Transcript_75467~~R_Transcript_75467.p1 ORF type:complete len:819 (+),score=151.47,E1-E2_ATPase|PF00122.16|4.7e-50,Hydrolase|PF00702.22|7.2e+03,Hydrolase|PF00702.22|8.1e-30,HAD|PF12710.3|3.8e-10 R_Transcript_75467:253-2709(+)
ATGGAGACTCTCCCCTTTGCTTATACCGTATCAGGTCTTCAACCTCTCTTGAATTACAACCCTAAAATCGCCACTTGCACTTCTAAATCTCACAAATTCCTAATCTCTTCCTCTCCGATTCTCCACAACAAACCCTATTTATCTCCCCCTCTCAATCCCCCCTCTTTCACTTCCAATTTCTCAAAATGCCCCTCAATTCGCTCCCTCCCATGTGATCACCACCACCACCGCCATCATCATCATGATCACCATCATCACGGGGGTGACGTGAAGCTGAGCAAGTATCAAGAAAGGTTCATTAGTTTCGCAAAGTCAATAGGGTGGTTGGACTTAGCCAATTACTTGAGGGAGCACTTTCAATTGTGTTGTTGTTCAATGGCTTTGTTTTTAGCTGCTGCTCTTTGCCCCTACTTGATCCCTAAACCTGCCGCTAAGTCCTTGCAGAATGCCTTCATTTTCGTCGCTTTTCCTCTCGTTGGAGTGTCAGCATCACTTGACGCCCTTATTGATATCGTTGCTGGAAAAGTTAACATTCATGTCCTCATGGCCCTTGCAGCCTTTGCATCCGTATTTATGGGAAACTCCTTGGAAGGAGGATTGCTCATTGCTATGTTTAATTTGGCTCATATAGCTGAAGAATATTTTACAAGTCGTTCAATGGTTGATGTTAGCGAGTTGAAGGAGAATTACCCTGATTCTGCCCTTGTGCTGGATGTGCACGACAATGACATACCAAACTTGTCTGATTTATCCTACAAGAAAGTTCCTGTGACTGACATAGCTGTTGGCTCTTTTATCCTGGTTCAAGCTGGTGAGTCAGTGCCTGTGGACAGTGTGGTTTCACAAGGAAGGTCTACTATCACGATAGAGCACTTGACAGGGGAAGTGAAGCCGATAGAGAGGAGCGTTGGAGACAGTATTCCTGGTGGGGCCAGGAACTTGGATGGCATGTTGATAGTAAAGGCTTCAAAGGCATGGAAGGAGTCTATGTTAAGCAGGATCGTGCAGTTGACTGAAGAAGCCCATCAGAATAAACCGAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAACACTACAGCAAAGTGGTTATGGTGTTATCAGTTGCAATTGCTCTCCTAGGACCACTTATCTTCAAATGGCCACTATTCAGCACACCAGGTTGCAGGGGATCTATTTACAGAGCTTTAGGACTGATGGTGGCATCCTCACCATGTGCATTGGCTGTGGCTCCATTAGCGTATGCTACTGCAATCAGTGCTTGTGCTAGAAAGGGCATACTGCTTAAAGGTGGCCATGTGTTAGATGCTCTGGCTTCGTGCCACACCATTGCCTTTGATAAAACTGGAACACTAACAACTGGGAAGCTCAAGTTTAAGGCAATTGAACCAATTCATGGACATCGTGGTATTAGTGATAAATCTATAACTGATGCTTGCTGCATTCCTGATTGTGAAAAAGAGGCTCTTGCTATAGCTGCAGCGATGGAGAAGGGTACTACTCATCCCATTGGAAGAGCTGTTGTAGATCATAGTACGGGGCTTGACCTTCCTTCTGTTTCTATTGAAAGTTTTGAATCTATACCTGGCAGAGGTCTTTTTGCAACAGTATTTGCAAATGAGCCAGGAGTTGGGAGTGGTGAACCAGTAAAAGCAACTCTGGGCTCTGTAGATTACATTGCTTCACTGTGCAAAACAGAAGATGAATCTCGGAGGATTAAGGAAGCTGTGAGCACATCATCCTATGGAAATGGTTTTGTTCATGCAGCTCTTTCTTTGAATGACAAGGTGACCCTGTTTCATTTTGAGGATGAACCCCGACTAGGAGTTTCAGATGTCATCACATGGTTGCGGGATGAAGGCAAGTTCCACGTGATGATGCTGACAGGTGATCATGAATCAAGTGCACGAAGCGTTGCGAATGCTGTAGGTGTCAAAGAGGTGTATAGTGGCCTAAAGCCTGAGGACAAGCTTAATCATGTAGTGCGTATATCAAGAGAGACAGGCGAAGGCCTTATCATGGTTGGAGATGGTATAAATGATGCTCCTGCACTAGCGGCTGCCGCTGTTAGTATAGTGCTAGCTCAGCGTGCTAGTGCCACAGCCATAGCTGTTGCTGATGTGCTTCTCCTGCAGGACAACATTTCAGGAGTCCCATTTTGCATAGCTAAAGCTCGCCAAACAACTTCACTGGTCAAGCAAAATGTAGCCCTTGCTCTATCAGCCATATTTTTAGCCTCTCTACCATCTGTCTTGGGATTTCTTCCACTATGGTTAACAGTCCTTCTGCATGAAGGTGGCACCCTTATTGTTTGCCTCAACTCTATACGCGCCTTAAATGATCCCACATGGTCCTGGAAGCAGGAACTCCATCATTTCTTAGACAAGTGCAGAACTGCAATTGTGCAACTACCGAGAGAATTACAGGGCACAGGCCCCATCCAAACTGCACATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75467.p1 GENE.R_Transcript_75467~~R_Transcript_75467.p1 ORF type:complete len:819 (+),score=151.47,E1-E2_ATPase|PF00122.16|4.7e-50,Hydrolase|PF00702.22|7.2e+03,Hydrolase|PF00702.22|8.1e-30,HAD|PF12710.3|3.8e-10 R_Transcript_75467:253-2709(+)
METLPFAYTVSGLQPLLNYNPKIATCTSKSHKFLISSSPILHNKPYLSPPLNPPSFTSNFSKCPSIRSLPCDHHHHRHHHHDHHHHGGDVKLSKYQERFISFAKSIGWLDLANYLREHFQLCCCSMALFLAAALCPYLIPKPAAKSLQNAFIFVAFPLVGVSASLDALIDIVAGKVNIHVLMALAAFASVFMGNSLEGGLLIAMFNLAHIAEEYFTSRSMVDVSELKENYPDSALVLDVHDNDIPNLSDLSYKKVPVTDIAVGSFILVQAGESVPVDSVVSQGRSTITIEHLTGEVKPIERSVGDSIPGGARNLDGMLIVKASKAWKESMLSRIVQLTEEAHQNKPKLQRWLDEFGEHYSKVVMVLSVAIALLGPLIFKWPLFSTPGCRGSIYRALGLMVASSPCALAVAPLAYATAISACARKGILLKGGHVLDALASCHTIAFDKTGTLTTGKLKFKAIEPIHGHRGISDKSITDACCIPDCEKEALAIAAAMEKGTTHPIGRAVVDHSTGLDLPSVSIESFESIPGRGLFATVFANEPGVGSGEPVKATLGSVDYIASLCKTEDESRRIKEAVSTSSYGNGFVHAALSLNDKVTLFHFEDEPRLGVSDVITWLRDEGKFHVMMLTGDHESSARSVANAVGVKEVYSGLKPEDKLNHVVRISRETGEGLIMVGDGINDAPALAAAAVSIVLAQRASATAIAVADVLLLQDNISGVPFCIAKARQTTSLVKQNVALALSAIFLASLPSVLGFLPLWLTVLLHEGGTLIVCLNSIRALNDPTWSWKQELHHFLDKCRTAIVQLPRELQGTGPIQTAHL*

Click here to download the sequence:
Link to NCBI Protein BLAST