Transcript Information: R_Transcript_75504.p1


Annotated TAIR IDAT5G08540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2763914-2765431 | Forward length=346
E-Value1.5E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.252960954719
Replicate 213.431456883955
Replicate 317.264269144159
Condition 2: 8 Hour
Replicate 110.442501227502
Replicate 213.071250782164
Replicate 316.016127017988
Condition 3: 24 Hour
Replicate 119.412851699897
Replicate 216.703615189187
Replicate 319.312680606086


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75504.p1 GENE.R_Transcript_75504~~R_Transcript_75504.p1 ORF type:5prime_partial len:272 (+),score=38.22 R_Transcript_75504:2-817(+)
GCCCATTTGCCCAATTCGGCCGCTATAGTAATACTGCCCTTAAGCCCAAAACCCAAAATCCTGGAACCAAAAACAAGAAAAATGCTCTGCTCAACATCGTCATCAACCTCTTCGATTCCCACTCGTTGTCAATGGCTACCAAGAAGACCATCACCTCAAACCCAGAAAACATCCATTCTAATCCCTTCTTACTCTCCTCCCATTCTCTCTCCTCCTCTTCGCATTCACAGACTCAAGGCCAAGGCCACTGGAAACTCATCCTCAGCACCCAAACCCAGCGACAATAAAAAACAACAACAAAATGAGGAAGTTGAAGAAATCCAAGTCGAAGAAGATATGCCTTGGATTCAAGATAAGGCCTTAGATTTGGTAGAATTTACAGGCGCTGTTACTCAAAAGATTCCTGGCCCTAGGGTTGGTCAGACCTCTTTGCCTTGGGTTTTGGCCCTCGCTTTCACTTACGCTGGTGTTAGCTTCGTTATCGCCGTCTTCAAGACCGTCAAGAAGTTCAATTCTCCTCGTGCCAAACGCCGTCAATTGGTTAATCAAAATGCGACGTTGATTAAGTCGATTGATGAGGTGTTCAAGAAAGGCAGAGAGGAACTTCAACATTGGTCGTTACAGGATCTTGTGAAGAAGACAGGTTTTGACATGGAGGAAATTCTGCGGAAATACATTCGTTATGCATTGAATGAGAAACCTTTCAATGGAGACTTGGTTGCAGATTTAATTCAACTAAGGAAAGCTTCGATGTTGACTGATTCCCAGGTTGCTGAAATTTTAAATGAAATCTCGAGGCGAATTGTCAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75504.p1 GENE.R_Transcript_75504~~R_Transcript_75504.p1 ORF type:5prime_partial len:272 (+),score=38.22 R_Transcript_75504:2-817(+)
AHLPNSAAIVILPLSPKPKILEPKTRKMLCSTSSSTSSIPTRCQWLPRRPSPQTQKTSILIPSYSPPILSPPLRIHRLKAKATGNSSSAPKPSDNKKQQQNEEVEEIQVEEDMPWIQDKALDLVEFTGAVTQKIPGPRVGQTSLPWVLALAFTYAGVSFVIAVFKTVKKFNSPRAKRRQLVNQNATLIKSIDEVFKKGREELQHWSLQDLVKKTGFDMEEILRKYIRYALNEKPFNGDLVADLIQLRKASMLTDSQVAEILNEISRRIVKD*

Click here to download the sequence:
Link to NCBI Protein BLAST