Transcript Information: R_Transcript_75504.p2


Annotated TAIR IDAT5G08540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2763914-2765431 | Forward length=346
E-Value1.2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.701800747355
Replicate 242.396375840602
Replicate 344.712189730951
Condition 2: 8 Hour
Replicate 136.728797420868
Replicate 240.206585618286
Replicate 342.935540505915
Condition 3: 24 Hour
Replicate 135.761199720077
Replicate 248.35191372165
Replicate 345.669537664007


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75504.p2 GENE.R_Transcript_75504~~R_Transcript_75504.p2 ORF type:complete len:104 (+),score=36.92 R_Transcript_75504:830-1141(+)
ATGGATGCATCTGGTTATTCTGAGAAGGGTTTCAAGAGAAAACTTGCTGTGCAGGCTCTATTTGGAAAGGTTTTCTATCTATCTGAGCTGCCAGAGTTTTGTTCAAGGGACAGCTCTTTAATTGTGAAGGAAATATTTGGGGTCACAGATGAAGATGCAGACAAACTACGAATACATACCCTCTCTGATGTAGGGGACATGGAAGCCCTTGAGAGGATGGCTGAAGATGGGTCTGGTTTAGGAGATTCCCAGATGTTTGAAGACACTTCTGGTGATGTTGGATTTGACGATGTAGGAGATTCTAGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75504.p2 GENE.R_Transcript_75504~~R_Transcript_75504.p2 ORF type:complete len:104 (+),score=36.92 R_Transcript_75504:830-1141(+)
MDASGYSEKGFKRKLAVQALFGKVFYLSELPEFCSRDSSLIVKEIFGVTDEDADKLRIHTLSDVGDMEALERMAEDGSGLGDSQMFEDTSGDVGFDDVGDSSE*

Click here to download the sequence:
Link to NCBI Protein BLAST