Transcript Information: R_Transcript_75630.p1


Annotated TAIR IDAT1G74040.1
Annotated Gene Name2-isopropylmalate synthase 1
Annotated Gene Symbol(s)IMS1, MAML-3, IPMS2
Annotation TypeOrtholog
Chromosome Positionchr1:27842258-27845566 | Forward length=631
E-Value9.8e-311
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.092955745539
Replicate 228.039153941765
Replicate 333.837039157781
Condition 2: 8 Hour
Replicate 129.884323360811
Replicate 234.474493421292
Replicate 342.506212586638
Condition 3: 24 Hour
Replicate 138.323268758057
Replicate 230.078510549984
Replicate 343.740940547516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75630.p1 GENE.R_Transcript_75630~~R_Transcript_75630.p1 ORF type:complete len:635 (+),score=129.31,HMGL-like|PF00682.15|2.4e-90,LeuA_dimer|PF08502.6|2.9e-35 R_Transcript_75630:361-2265(+)
ATGGCTACCACCATTTCAACCACCCCAACAATCTCCCAAACAAAACCCATAAAAAACCCCACCTTTCCAAGAACCCCATTCACCAATCTCCTCTCCTTACACTCCCCCAAAAAACCCACTTTTTTCCACCTCTCATTCACCACCAAAACCCCCAAACAACCCACTTCCCTTACAAGATGTTCTTCAAACCCAAACCCACCACAAACCCGACCCAAATACATCCCAAACCAAATCCCGGACCCGAATTACATCCGGATCTTTGACACCACCCTTAGAGATGGGGAACAATCCCCTGGTGCTTCAATGACTCCCAACCAAAAACTTGACATAGCTAGACAGTTATCCAAGCTTGGGGTTGACATCATTGAGGCTGGTTTTCCTGCAGCTTCTAATGCTGATTTGGAAGCTGTGAAAGCCATTGCAATGGAAGTTGGTAATGATGTGGATGAGAATGGTTATGTGCCTGTAATTTGTGGGCTTTCTAGGTGTAATAAAGGTGACATTGATGCTGCTTGGGAAGCTGTTAAGTATGCTAAGAGGCCTAGGATTCATACCTTTATTGCTACTAGTGAGATTCATATGATGCATAAGTTGAATAAGACTAGAGAGGAAGTTGTTGAGATTGCTAGGAGTATGGTTAAATATGCTAGGAGTTTGGGTTGTGATGATGTTGAGTTTAGCCCTGAGGATGCTGGCAGATCGGATAGGGAGTTTCTGTATCATATTCTAGGAGAAGTTATCAAGGCAGGGGCAACTACTCTAAATATTCCCGATACTGTAGGTTATACTGTCCCGGAAGAGTTTGGTAAATTGATTGCTGATATAAAGGCCAACACTCCTGGAATTGAGAATGTGATAATCTCAACACACTGTCAGAATGACCTTGGGCTCTCTACTGCAAACACGGTTGCTGGGGCATGTGCTGGTGCAAGACAATTAGAAGTAACAATTAATGGAATTGGTGAAAGAGCTGGAAATGCTTCACTGGAAGAGGTTGTCATGACCTTAAAATGCCGTGGGCAATCACTCGGGGGACTGTACACTGGGATTCGGACAGAACACATTGTTAAGGCCAGCAAAATGGTGGCTGAGTACAGTGGACTTCTTGTACAGCCTCATAAGGCCATAGTCGGAGCGAATGCTTTTAAGCATGAAAGTGGAATTCACCAGCATGGAATGCTAAAACACAAAGGTACATATGAGATCATGTCTCCTGAAGATATAGGGCTTCAGCGAGCTGATGAATCCGGTCTTGTTCTTGGGAAACTTAGTGGACGTCATGCATTGCAAAAAAGACTTGAGCAGATGGGTTACTCCTTTGAGGGCAAGGAACTTGACAACATCTTTTGGCGCTTCAAATCTGTTGCTGAAAAGAAAAAACATGTTCTGGATGAGGACATTGAAGCCTTAGTAATTGATGAGGTTTACCAGCCAGATTCTGTGTGGTCACTTGGTGATCTCCAGGTTACTTGTGGAACTCTTGGACTGTCAACAGCAACGGTTAAGCTCATAGACGCTGAAGGGAAGGAACATATCGCTTGTTCTGTTGGAACAGGTCCAGTGGACTCGGCTTACAAAGCTGTTGATCTCATTGCGAAGGTGCCCGTTACTCTGCTTGAGTACTCCTTGTCAGCGGTGACGGAAGGCATAGACGCCATAGCTACGACCAGGGTCTTGATCAGGGGCAATGATGGTGTCACATCAACTCATGCTAGTGGTGACAAAATTCTACGAACATTTAGTGGGAGTGGATCTGAAGTGGATGTGGTTGTCTCAAGCGTCCGGGCCTATGTCAGTGCCTTAAACAAGATGCTAGGTTACAAGAAGAAACCTAGCCAGAAAGGTTCGGCTGGGAATTCCCATGTAACGGCTTCTGTAGACGAGCCTGCTGCCACTTCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75630.p1 GENE.R_Transcript_75630~~R_Transcript_75630.p1 ORF type:complete len:635 (+),score=129.31,HMGL-like|PF00682.15|2.4e-90,LeuA_dimer|PF08502.6|2.9e-35 R_Transcript_75630:361-2265(+)
MATTISTTPTISQTKPIKNPTFPRTPFTNLLSLHSPKKPTFFHLSFTTKTPKQPTSLTRCSSNPNPPQTRPKYIPNQIPDPNYIRIFDTTLRDGEQSPGASMTPNQKLDIARQLSKLGVDIIEAGFPAASNADLEAVKAIAMEVGNDVDENGYVPVICGLSRCNKGDIDAAWEAVKYAKRPRIHTFIATSEIHMMHKLNKTREEVVEIARSMVKYARSLGCDDVEFSPEDAGRSDREFLYHILGEVIKAGATTLNIPDTVGYTVPEEFGKLIADIKANTPGIENVIISTHCQNDLGLSTANTVAGACAGARQLEVTINGIGERAGNASLEEVVMTLKCRGQSLGGLYTGIRTEHIVKASKMVAEYSGLLVQPHKAIVGANAFKHESGIHQHGMLKHKGTYEIMSPEDIGLQRADESGLVLGKLSGRHALQKRLEQMGYSFEGKELDNIFWRFKSVAEKKKHVLDEDIEALVIDEVYQPDSVWSLGDLQVTCGTLGLSTATVKLIDAEGKEHIACSVGTGPVDSAYKAVDLIAKVPVTLLEYSLSAVTEGIDAIATTRVLIRGNDGVTSTHASGDKILRTFSGSGSEVDVVVSSVRAYVSALNKMLGYKKKPSQKGSAGNSHVTASVDEPAATSV*

Click here to download the sequence:
Link to NCBI Protein BLAST