Transcript Information: R_Transcript_7575.p1


Annotated TAIR IDAT5G67100.1
Annotated Gene NameDNA-directed DNA polymerases
Annotated Gene Symbol(s)ICU2
Annotation TypeOrtholog
Chromosome Positionchr5:26776994-26785104 | Forward length=1524
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8149383857095
Replicate 27.8110027983262
Replicate 38.8466381818796
Condition 2: 8 Hour
Replicate 16.1096258765854
Replicate 26.5886028377961
Replicate 310.462630492989
Condition 3: 24 Hour
Replicate 114.875948590485
Replicate 212.186561488862
Replicate 313.928539346207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7575.p1 GENE.R_Transcript_7575~~R_Transcript_7575.p1 ORF type:complete len:1551 (+),score=359.49,DNA_pol_B|PF00136.17|1.1e-123,zf-DNA_Pol|PF08996.6|1.3e-45,DNA_pol_B_exo1|PF03104.15|2.9e-27,DNA_pol_B_exo1|PF03104.15|8.6e+02,DNA_pol_alpha_N|PF12254.4|6.4e-18,DNA_pol_alpha_N|PF12254.4|7.1e+03 R_Transcript_7575:65-4654(+)
ATGGAAGACGAAGAACAGCAAACAGCAGCCGGAAGACGGCGAACCAGGGCCACAACCACCAACCCTAGAGCCCAAGCCCTAGAGCGTCTCAAAGCCCTTCGCAACGGAGAGCGCCGCCCTTCCTATGACCTCAAGATCGAAACCCCTATATACGACACCGTCGACGAAGACGAATACAAAACCCTAGTCGCCAAGCGCCGCGAGGAGTTCAGCGACTTCATCGTCGGTGAGGCCGGCGACGGCTACCTCGATGACGGCGAGGAAGAAGACTGGACTAAGGCCGGCGTTCCTTTCTCCTCCGACGAGGATTCTGATGGCAGCAACGAGTTAGGGAAATCGAAGAGAAAGAAAGCCGACAAGGAGAAGGATTCTGAGAAGAAACCTAGAGCTTCTGCTGCTTCTAATGCTCTTGCTAATGCTGCTGCTTCTTTGATGGGGAAACAACGGATCTCGTCGATGTTTACTTCGTCGGTTTTTAAGAAGAGGAATGAAGATAAGGCTCGAGGCGGCCTGGTTAGTGATAGTGTTGTTGATGATGTTCTTGCAGAGTTTGCTCCTGATCAGGTTGATAGGGAGAAAAGGAGGAGATTTCAATCCAAGAACTCAGGGTTAGGGTTAGGGTTGAGTAATGGTGTTAAGATTGAGAAGAAGGAAGATAACCACAGACCTCATTCGATTGATTTAGTTCCGAAAAATGTGGCTAGAGTTGAAGAAAAGGTAGCTTTGAAGGCGGTGGAAAATAGGGTTGATTTGGATAATGGCAATGGAAATGTTGGATTGGAGAATTCCGTGGATGTCGGGGATCAGAATGAGGATGAAAAATTGCTGGAGGTTTTGAAAGAGGAAGCTGAGCCTGAGTTGAAGATGAAGGAGGAAGGTGAAGAGGTTTCGTTTGCGCTGAATGCAAAAATTAAGGAGGAAAGAATTCAAGCTTTTAGCGCCACCACGGAGTTGCAGGCCATAAAGGGCGTCAAAGATGAAAATGTGGTCGCAGTGGAGACGACTGGTGGTTTCGATTCGGAGAAGTCAGATTTTGTGGTGGAGCCTGATGGCTCCTTGCCTTTCTATATTATTGATGCTCATGAGGAGATTTATGGTATCAATGCTGGCACTGTTTATCTATTTGGTAAAGTCAAAGCTGGAAATGCGTACCACAGCTGCTGTGTTGTAGTAAAGAATATGCAGAGGTGTGTTTATGCCATTCCAAATGGTTCTGTTTTCCACAATGAGGTGGTTTTGAAATTGGAAAAAGATGCTACTGGTACTAAGTTATCAGCTGCCTATCGCGCAAAGCTTCATGAAGTGGCATCAGGATTGAAAAGTGAAATTGCAAAGCGTTTGGTGGATCTTAATGTCTCGACATTCAGCATGTCGCCTGTCAAGAGGAAATATGCATTTGAGCGTTTTGACATACCTACCGGAGAGAATTATGTGCTTAAGATCAACTATCCATTCAAGGATCCTCCACTTCCATCGGATCTTAAGGGAGACAACTATTGTGCAGTGCTAGGGACTCGTTCCAGTGCTCTGGAACTCCTCCTGGTTAAGAGGAAGATAAAAGGACCATCTTGGTTGTCAATCTTAAAATTTTCTAGCTGCCCTTCTCATCAAAGGGTGAGCTGGTGCAAGTTTGAGGTTATTGTTGATTGTCCTAAGGACATCCGAGTCTCATCTTCCACAAGGAATACAGCAGAGATACCTCCGGTGATTGTGACAGCAATCAATTTGAAAACTGTGATCAATGAAAAGCAGAATGTAAATGAAATTGTTTCAGCGTCCATCATCTCTTGCGGCAAAGCCAAGATTGACTCTCCAATGCTGGCTTCAGAGTGGAAGCGACCTGGTGTGCTTAGTCATTTTGCAGTTTTAAGAAAGCTTGAAGGAGGTATATTTCCAGTGGGATTCAATAAAGAAGCTGTGGAGAGAAATTCAAAGGCAGGAAGTACGATACTGGCTTTTGAGAGCAGTGAAAGAGCTTTGTTGAACCGGCTGATGGCAGAGATGCACAAGTTGGATAGTGATGTCCTTGTTGGCCATAACATTTCAGGATTTGATCTTGATATTCTCCTTCACCGAGCTCAGGCATGCAGAGTACCAAGCAGCATGTGGTCTAAAATTGGTCGTCTTAAAAGATCTACAATGCCTAAGCTCACCAAGGGAAGCACCATCTTTGGTTCAGGAGCAAGTCCTGGAATTATGTCTTGTATTGCTGGTCGTGTCTTGTGTGATACGTATCTGTGTTCGCGTGACCTCTTAAAAGAGGTGAGCTACTCATTGACAGAGCTAGCAAAGACTCAGCTGAACAAGGAGCGCAAAGAGATTGCCCCACGTGATATTCCTAGAATGTATCAAGCAACTGAGTCCCTTATGAACCTTATAGAATGCAATGAGACAGATGCATGGTTGTCTATGGAACTCATGTTTCATTTGAGTGTTCTTCCACTCACACGTCAGCTGACTAATATTAGTGGCAACCTTTGGGGAAAGACTCTACAAGGTGCTAGAGCACAACGGGTGGAGTATCTTCTATTACATGCTTTTCATGCTAAGAAGTATATTGTTCCCGACAAACATTCTTTTCGTGAAAAGGAAAGCAAAATGTCAAAACGTAAAATGGATCCTGATGTTGAAGTGGCTACGGATGACACAAATTTTGATACCACAGCTCCACATGAAGATCCCGTGAAAGGCAAGAAAGGTCCAGCTTATGCTGGTGGGTTGGTTTTGGAACCAAAAAAGGGTTTATATGACAAATATGTGTTGCTTTTGGACTTCAATAGTCTTTATCCTTCTATCATTCAGGAGTACAATATTTGTTTTACAACGGTTGAAAGATACCCTGATGGATCAGTTCCCCGTTTACCATCTTTTGAGAACACAGGAGTTCTCCCAGAGTTGCTTAAAAGTTTGGTGGAAAGAAGGAGATCAGTTAAAAAATGGCTTAAGGAAGCAACAGGTCTCAAGGCCCAGCAGTTTGACATACAACAGCAAGCACTTAAGCTCACTGCAAACAGTATGTATGGATGCCTGGGTTTTTCCAACTCAAGATTTTATGCAAAGCCACTTGCAGAACTTATAACACTACAGGGGAGAGAGATTTTGCAAACTACTGTCGACCTTGTGCAGAACATCTTGAACTTGGAGGTTATATATGGTGATACAGATTCAATCATGATATATAGTGGACTTGATGATATTGCAAAGGCCCAGGCCATGGCAGGGAAGGTCATCAAAGAGGTTAATAAGAAATATAGGTGCTTAGAAATTGATCTGGATGGGTTGTACAAGAGAATGCTGCTTCTCAAGAAGAAGAAGTATGCAGCTGTAAAATTACAGTTTAGGGGTGACAAAGCATATGAGGTCATTGAAAGGAAAGGTCTTGATATGGTACGTCGTGACTGGAGCTTGTTAGCTAAGGAACTTGGGGACTTCTGCCTGAGCCAGATACTTTCTGGAGGGTCTTGTGAGGATGTTGTGGAATCAATACACGATTCACTTAAGAAGGTGCAAGAGGAGATGAGAAATGGAGAAGTAGCTCTTGAAAAATATATCATCACAAAATCATTGACAAAACAACCTGAAGCATATCCTGATGCCAAAAATCAACCACACGTCCAGGTGGCATTGAGATTGAAACAGAATGGTTACACTACTGGTTGTTCTGCTGGCGACACAGTCCCATATATTATTTGCTGCGAGCAGGGGGCTAATTCAGCGGCTTCAACTGGTATTGCTCAGCGTGCTAGGCATCCTGATGAATTGAGAAGGGACAATTCAACTTGGATGATTGACATTGATTATTACCTGTCTCAGCAGATTCATCCAGTGGTTTCACGTTTATGCGCATCCATCCAGGGTACAGACCCTGCACGTTTAGCAGACTGTTTGGGGCTTGATACCTCTAAGTTTCAAATTAAATCAAGTGACAGCACCAGCAATGATCCTTCCAGCTTGTTGTTGTGCTCGATTGATGATGAGGAGAGGTATCAAGGTTGCGAGCCTTTAAGCTTATCTTGCCCCAGTTGTTCAAGCACTTTTGACTGCCCAAGTGTTTTTAGTTCCTTATGTAAACCAATGTCCAAGGAGAAGGAGCCAGAGGAAGCTACTTGCAGTATCTGGAAAAGATTGCGTTGCCCAAAGTGCCCAGAGGAAGGGGATGTTGGTAGAATCTCTCCTGTGATGATTGCTAATCAGGTCAAGAGGCAAGCAGATAGATTCATAGCAATGTACTACAGGGGTTTAATGATGTGTGATGATGAAACTTGCAAGTACACTACACGTAGCATTAATCTACGGGTAATAGGTGACTCTGAGAGAGGAACAATCTGTCCAAATTACCCTCGCTGTAATGGTCGTCTAGTACGAAAGTATTCAGAGGTGGATCTATACAAGCAGCTGACATATTTCTGTTATATACTAGACACAGTTCGATGTGTGGACAAGGTGGATGTAAATGCAAGACAACCACTGGAAAAAGAGCTCACTAGAGTCCGACCCATGGTTGATTTAGCAGCTGATATAGCTCAGAAGTTGCAAGACCGCTGTGCTTATGGGTGGGTGCAACTGAATGATCTCTTTGTCACAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7575.p1 GENE.R_Transcript_7575~~R_Transcript_7575.p1 ORF type:complete len:1551 (+),score=359.49,DNA_pol_B|PF00136.17|1.1e-123,zf-DNA_Pol|PF08996.6|1.3e-45,DNA_pol_B_exo1|PF03104.15|2.9e-27,DNA_pol_B_exo1|PF03104.15|8.6e+02,DNA_pol_alpha_N|PF12254.4|6.4e-18,DNA_pol_alpha_N|PF12254.4|7.1e+03 R_Transcript_7575:65-4654(+)
MEDEEQQTAAGRRRTRATTTNPRAQALERLKALRNGERRPSYDLKIETPIYDTVDEDEYKTLVAKRREEFSDFIVGEAGDGYLDDGEEEDWTKAGVPFSSDEDSDGSNELGKSKRKKADKEKDSEKKPRASAASNALANAAASLMGKQRISSMFTSSVFKKRNEDKARGGLVSDSVVDDVLAEFAPDQVDREKRRRFQSKNSGLGLGLSNGVKIEKKEDNHRPHSIDLVPKNVARVEEKVALKAVENRVDLDNGNGNVGLENSVDVGDQNEDEKLLEVLKEEAEPELKMKEEGEEVSFALNAKIKEERIQAFSATTELQAIKGVKDENVVAVETTGGFDSEKSDFVVEPDGSLPFYIIDAHEEIYGINAGTVYLFGKVKAGNAYHSCCVVVKNMQRCVYAIPNGSVFHNEVVLKLEKDATGTKLSAAYRAKLHEVASGLKSEIAKRLVDLNVSTFSMSPVKRKYAFERFDIPTGENYVLKINYPFKDPPLPSDLKGDNYCAVLGTRSSALELLLVKRKIKGPSWLSILKFSSCPSHQRVSWCKFEVIVDCPKDIRVSSSTRNTAEIPPVIVTAINLKTVINEKQNVNEIVSASIISCGKAKIDSPMLASEWKRPGVLSHFAVLRKLEGGIFPVGFNKEAVERNSKAGSTILAFESSERALLNRLMAEMHKLDSDVLVGHNISGFDLDILLHRAQACRVPSSMWSKIGRLKRSTMPKLTKGSTIFGSGASPGIMSCIAGRVLCDTYLCSRDLLKEVSYSLTELAKTQLNKERKEIAPRDIPRMYQATESLMNLIECNETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKHSFREKESKMSKRKMDPDVEVATDDTNFDTTAPHEDPVKGKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERYPDGSVPRLPSFENTGVLPELLKSLVERRRSVKKWLKEATGLKAQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQTTVDLVQNILNLEVIYGDTDSIMIYSGLDDIAKAQAMAGKVIKEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFRGDKAYEVIERKGLDMVRRDWSLLAKELGDFCLSQILSGGSCEDVVESIHDSLKKVQEEMRNGEVALEKYIITKSLTKQPEAYPDAKNQPHVQVALRLKQNGYTTGCSAGDTVPYIICCEQGANSAASTGIAQRARHPDELRRDNSTWMIDIDYYLSQQIHPVVSRLCASIQGTDPARLADCLGLDTSKFQIKSSDSTSNDPSSLLLCSIDDEERYQGCEPLSLSCPSCSSTFDCPSVFSSLCKPMSKEKEPEEATCSIWKRLRCPKCPEEGDVGRISPVMIANQVKRQADRFIAMYYRGLMMCDDETCKYTTRSINLRVIGDSERGTICPNYPRCNGRLVRKYSEVDLYKQLTYFCYILDTVRCVDKVDVNARQPLEKELTRVRPMVDLAADIAQKLQDRCAYGWVQLNDLFVTV*

Click here to download the sequence:
Link to NCBI Protein BLAST