Transcript Information: R_Transcript_75927.p1


Annotated TAIR IDAT5G03420.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:845641-848705 | Forward length=598
E-Value4.2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5737354809499
Replicate 23.8768306070313
Replicate 33.9364411956825
Condition 2: 8 Hour
Replicate 14.3421003654164
Replicate 23.9652752076691
Replicate 35.9067398362502
Condition 3: 24 Hour
Replicate 15.9178259947098
Replicate 25.7254968235137
Replicate 36.6023240828849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75927.p1 GENE.R_Transcript_75927~~R_Transcript_75927.p1 ORF type:complete len:547 (+),score=145.61,AMPK1_CBM|PF16561.1|1.2e+04,AMPK1_CBM|PF16561.1|1.4e-16 R_Transcript_75927:188-1828(+)
ATGGCTACCCTTTCTCACTTAATATATCCACAAATTATCTCTTTCTCTTCCTCCCAACAAAATCGCTCTTCTTCCCTTTTCTTTCCTTCTTGTTTTCTCATAAACCGTAGTAGGAGACAGTCCATAGTATGTCTTGCTTCAGCTAAGAAATCAAGGTCTAGTAGGAAGCTTATGAGTGATGAGGATCTGTGCAATGTGCTCCGTGAATTTGTGGCTTCAGTTGGACTGCCTGAAGGTCACGTGCCCTCCACCAAGGATTTGTCTAAGCATGGAAGGAAAGACCTTGCTAACATTGTCAGAAGAAGAGGACATAAAGTTATCAAAGAGCTTCTCTCTAACACCACCGAAGCAGTGACTGATGTGTCTGATACACAGCAGAACTTAACGGACGAAGTCAGTGGAATTTATGTCCATGAAGAAACAGGTCAGAAGGAAAAAGTGAATGATTTGAGTGAAGAGTCTGCAGATATTACTTTGGTGAATGATAGTTTTGCTACTAAGAATAATTTGGAGACAAAGGATGAATCAGCTGTCAGTGCAGATGATATTTCTTCAAAAAATGACAGTTCTGCTACTGAGGAAAGTTTAGAGACAAAGTATGAATCAGAAGTCAGCCGGGACAATATTAGTTTAATGAAGGACAGTTCTGCTGCTGTACATAGTTTGGAGACAAAGTGTGAATCAGCTGTTGGGCCAGACGATAATACTTTGAAGAATGATAGCTCTGCTGTTGGGAATAGTTTGGATGCAAAATATGATCCAGCTGTCAGCTCAGATGATCAGAATCTCATACTTATGGAGTCTGCAGCTTCCTTACTGGAAAAGGTGGACACGTTTATGAGATACGGGCAATTGGATACTGTTGAAGATGATTTGGGCAACGATATAAAAGTGGACAACATAACTGAAAGTGAAAGTTCAAGTAGTGGGGAGAATTTTGTTGAAAGTCAATCAGCAATCTATGGTGAAGTGGATGTAAAATGTTGGACTAGTGTTGGGAGCGATACAGGACTAAATGGCAGTTTGATGATAAAAAGCTTGCCCTCTCCCCCAACATTGGAAGACAATGCTACAAGTGATAGTTATTCATCTGCTCTAGGAAAACAAGATGGTGATTTTCATGCGGATGTGAGTATTCAGGCCAGCAAAACGGAGAACGCAGTTGAGATCAATCATCTCAAACACATGCTGCATCAAAAAGAGTTGGAATTGTCTCGGTTGAAAGAAGAGATTGAGAAAGAGAAGGAAGCTCTGTCGATATTGCAAGCAAAGGCAGAAAGTGAAATTAGCAAAGCTCAAATGCTTATATCTGAAAAGGATGCAGAATTACATTCTGCTGAAGAAAGTCTTTCTGGACTTGTGGAGGCCAAGATTCAGTACTCTGGAGAAGGTCAGATGGTAGAAGTTGCAGGCAGCTTCAATGGGTGGCATCAAAGAATTAAATTGGAGCCTCCATTATCTTCTCGTTTCTTGGACCCTACTGATACAAGGAAGTCTAGGCTCTGGTCAACAACTTTGTGGCTTTATCCTGGTGTTTATGAGATAAAATTTGTTGTTGATGGCGAGTGGAAAATTGATCCCCAGAAAGAATCAACGATCAAGGGTGGTATAGAGAACAACCTCCTTCGGGTCGATAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75927.p1 GENE.R_Transcript_75927~~R_Transcript_75927.p1 ORF type:complete len:547 (+),score=145.61,AMPK1_CBM|PF16561.1|1.2e+04,AMPK1_CBM|PF16561.1|1.4e-16 R_Transcript_75927:188-1828(+)
MATLSHLIYPQIISFSSSQQNRSSSLFFPSCFLINRSRRQSIVCLASAKKSRSSRKLMSDEDLCNVLREFVASVGLPEGHVPSTKDLSKHGRKDLANIVRRRGHKVIKELLSNTTEAVTDVSDTQQNLTDEVSGIYVHEETGQKEKVNDLSEESADITLVNDSFATKNNLETKDESAVSADDISSKNDSSATEESLETKYESEVSRDNISLMKDSSAAVHSLETKCESAVGPDDNTLKNDSSAVGNSLDAKYDPAVSSDDQNLILMESAASLLEKVDTFMRYGQLDTVEDDLGNDIKVDNITESESSSSGENFVESQSAIYGEVDVKCWTSVGSDTGLNGSLMIKSLPSPPTLEDNATSDSYSSALGKQDGDFHADVSIQASKTENAVEINHLKHMLHQKELELSRLKEEIEKEKEALSILQAKAESEISKAQMLISEKDAELHSAEESLSGLVEAKIQYSGEGQMVEVAGSFNGWHQRIKLEPPLSSRFLDPTDTRKSRLWSTTLWLYPGVYEIKFVVDGEWKIDPQKESTIKGGIENNLLRVDR*

Click here to download the sequence:
Link to NCBI Protein BLAST