Transcript Information: R_Transcript_75967.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value2E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0546661105375
Replicate 22.3903480473939
Replicate 34.0879716325441
Condition 2: 8 Hour
Replicate 14.3697851290468
Replicate 23.9217546613772
Replicate 36.3670264945357
Condition 3: 24 Hour
Replicate 13.7438885632871
Replicate 22.1715947215338
Replicate 34.8489684229434


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75967.p1 GENE.R_Transcript_75967~~R_Transcript_75967.p1 ORF type:3prime_partial len:325 (+),score=78.79,MutS_V|PF00488.17|3.5e-16 R_Transcript_75967:125-1096(+)
ATGAATTGGTTGCCTCTTGCTTTCAGTAACGTCCCTGAATTGGTAATTGAATCTTTGTTGTATGGTTCACAGGATATACGAGCAAAGTCAACCAATCAATCACTGGTGCTTTTAGATGAAATTGGTGCAGGCACCAATCCCCTAGAGGGTGCAGCAATTGGGATGTCTGTGCTAGAATCATTTGCTGAAGCTGGTGCTTTATTAACCATAGCCACGACACATCATGGTGAACTCAAAACCCTTAAATACAGCAATGACGCCTTTGAGAACGCATGTGTGGAGTTTGATGAAGTCAACTTGAAGCCAACTTATAAGATTCTTTGGGGAGTTCCAGGTCGTTCAAATGCAATAAATATAGCAGAAAGGTTAGGATTTCCAAAATCAATTTTATGTAATGCTCGTCAACTGTATGGAGTTGCCAGTGCGGAGATAGATGAGGTCATATATGAATTGGAGAAGTTCAAGCAAGATGTTGAGGAACATGTATACGAAGCACACAACCATCTGATGGTCTCAAGAGAACTTCATGAGAAGGTACTTAATGTCCAAAGAAAGCTTGCTGTGCATAGATCTGATCTTAGTTATACAAAGATGCAACAAATATCAGAGTATGCATCTAGGGCTCGTTCAACTCTTCACAGGAAGATGCAGCTATATCGTGCATCTGCACGACAGATTCCCAAGCCCACAGGAACAGAACCAAGTGTGCAAGGAGAACCAGTTAACAGCCAGAAGCATGCAGCTGGTGATAATGCTTCCGCTTCAGAAAGTGCAATTGGTATTCCTGTCGAGGAGTCTGAGCAGATGTCATCAGGTGCAGAAAACAGAACTAGATTGCCTATGGTGGGTACTGTTGTTCAACTTCCTTCACTTAGGACCAAGGCAACAGTTCTTCAGGTGGAATCATCTAAAGAAGAGATTTTAGTTCAAGCTGGCAAGTTGAAGCTGAAGTTGAAAATATCTGATATTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75967.p1 GENE.R_Transcript_75967~~R_Transcript_75967.p1 ORF type:3prime_partial len:325 (+),score=78.79,MutS_V|PF00488.17|3.5e-16 R_Transcript_75967:125-1096(+)
MNWLPLAFSNVPELVIESLLYGSQDIRAKSTNQSLVLLDEIGAGTNPLEGAAIGMSVLESFAEAGALLTIATTHHGELKTLKYSNDAFENACVEFDEVNLKPTYKILWGVPGRSNAINIAERLGFPKSILCNARQLYGVASAEIDEVIYELEKFKQDVEEHVYEAHNHLMVSRELHEKVLNVQRKLAVHRSDLSYTKMQQISEYASRARSTLHRKMQLYRASARQIPKPTGTEPSVQGEPVNSQKHAAGDNASASESAIGIPVEESEQMSSGAENRTRLPMVGTVVQLPSLRTKATVLQVESSKEEILVQAGKLKLKLKISDIK

Click here to download the sequence:
Link to NCBI Protein BLAST