Transcript Information: R_Transcript_75969.p2


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value6E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75738427198003
Replicate 20.69697262792691
Replicate 31.6158279632141
Condition 2: 8 Hour
Replicate 10.8128087949293
Replicate 20.83505367871647
Replicate 30.90381463669977
Condition 3: 24 Hour
Replicate 10.66682427632336
Replicate 20.36606238822535
Replicate 30.72656281118331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75969.p2 GENE.R_Transcript_75969~~R_Transcript_75969.p2 ORF type:5prime_partial len:241 (+),score=31.22 R_Transcript_75969:2-724(+)
GCGGGAGCCCTCCATTTTCCGACATTTTCTTCAGTTCTTCTTTCTTCAGTTCTTCAACCATCATCATCATCATCATCAACAACAACAATTATGCTAACATCAGCTGTTTTCCGCAACACAATCACCTCAATTTCGATCATTCCAACAAAAACCATAAACCCCCATTCAAAATCATCATCGAAACCAAAGAGTCGATTCTCCATAGTCCAATTCCGAATTCGCGCCACTCTCAAACCCCTAATACACCCCCAATCCCCAAACCAAACACTCGAATTCCACGACGACCATGATCCAGAAAAAAACCCCATACCTAGGGTTTTGCTAAACAGTCTTAGGGTTTTAGAGTGGGACAAGCTTTGCGACGTCGTTTCTTCTTTTGCCGGAACTTCCTTTGGCCGCCTTGCCTCCAAGGAACAATTATGGGCGATTGATCAGACTTATGAAGAGAGCTTGAAGCTACTAAGAGAGACTAATGCCGCTGTTGAAATTCATAAGTATAATAATTCCTTGATGGATTTCACCTCCATTGATGCCCTTCTGGTGAGGACTGGCATTGATCGAGCACGTAGAAGCTCACCAGTGAGCAGACCGGAAGCACTAGCTGTTGCAGAAATGCTGCAATTTGCAGAGACTTTGCAGCTTAACATTAAGTCAGCGATCAAGGACAATGCTGATTTGCTGGAGCGTTTTATGCCTCTAGCTGAGTTGGTAAATTTAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75969.p2 GENE.R_Transcript_75969~~R_Transcript_75969.p2 ORF type:5prime_partial len:241 (+),score=31.22 R_Transcript_75969:2-724(+)
AGALHFPTFSSVLLSSVLQPSSSSSSTTTIMLTSAVFRNTITSISIIPTKTINPHSKSSSKPKSRFSIVQFRIRATLKPLIHPQSPNQTLEFHDDHDPEKNPIPRVLLNSLRVLEWDKLCDVVSSFAGTSFGRLASKEQLWAIDQTYEESLKLLRETNAAVEIHKYNNSLMDFTSIDALLVRTGIDRARRSSPVSRPEALAVAEMLQFAETLQLNIKSAIKDNADLLERFMPLAELVNLR*

Click here to download the sequence:
Link to NCBI Protein BLAST