Transcript Information: R_Transcript_75971.p1


Annotated TAIR IDAT5G54090.1
Annotated Gene NameDNA mismatch repair protein MutS, type 2
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21948283-21952550 | Reverse length=796
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.8043132599
Replicate 210.831424817932
Replicate 39.4535742460312
Condition 2: 8 Hour
Replicate 111.271271166192
Replicate 211.890310185392
Replicate 311.812952943426
Condition 3: 24 Hour
Replicate 19.4746506019096
Replicate 28.051919912433
Replicate 311.117564285408


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_75971.p1 GENE.R_Transcript_75971~~R_Transcript_75971.p1 ORF type:complete len:126 (+),score=12.90 R_Transcript_75971:323-700(+)
ATGGAAAAACTTATTTATCAAAATTGGAAATTGACGATTCTAGCTCTCTTCATGTTAGTGCTGAATAGCTATAGGCCCTATAGCTCATTTTTCAATTCCGGAGGACAAAAATGCAAAGATAAACCATCAATCAGAGAGATTTTATTCAAGGAGTTCCTCGAAATGCTCCGAGAGAGGTTAATCTTGTGTTCAGTGGAAAGCCCAACAGTTACTCAAATGGAACAGGCCATTTTTTTGGATAGGGATGCAAGAGGAGTTCTTGTAACTGGTCATAATACAGGAGGCAAAACAATTTACTTGAAAGCAGTAGGCCTTGCTGCCATCATTAGGAAATCAGCAATTACACTTTTGAAAATGCGTGCGTGGAAGTTGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_75971.p1 GENE.R_Transcript_75971~~R_Transcript_75971.p1 ORF type:complete len:126 (+),score=12.90 R_Transcript_75971:323-700(+)
MEKLIYQNWKLTILALFMLVLNSYRPYSSFFNSGGQKCKDKPSIREILFKEFLEMLRERLILCSVESPTVTQMEQAIFLDRDARGVLVTGHNTGGKTIYLKAVGLAAIIRKSAITLLKMRAWKLM*

Click here to download the sequence:
Link to NCBI Protein BLAST