Transcript Information: R_Transcript_76034.p1


Annotated TAIR IDAT1G09900.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3218133-3219929 | Forward length=598
E-Value1.4e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3133413726556
Replicate 22.1438686000434
Replicate 32.5616935075114
Condition 2: 8 Hour
Replicate 15.1194109857287
Replicate 23.8053364559554
Replicate 35.2366072778426
Condition 3: 24 Hour
Replicate 14.0929640114221
Replicate 24.0750397301877
Replicate 34.5052487767195


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76034.p1 GENE.R_Transcript_76034~~R_Transcript_76034.p1 ORF type:complete len:617 (+),score=101.90,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|6.6e-09,PPR_2|PF13041.2|2.8e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|4e-18,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|3.7e-14,PPR_2|PF13041.2|3.1e-15,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|4.2e-16,PPR_2|PF13041.2|50,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.00043,PPR_1|PF12854.3|1.1e-13,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.6e-08,PPR_1|PF12854.3|4.5e-17,PPR_1|PF12854.3|6.5e-09,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-11,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|3.9e-06,PPR|PF01535.16|0.55,PPR|PF01535.16|0.013,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.00034,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|9.9e-05,PPR_3|PF13812.2|6.6e-07,PPR_3|PF13812.2|0.63,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|4.1,ATP13|PF12921.3|10,ATP13|PF12921.3|12,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|94,ATP13|PF12921.3|8.7,ATP13|PF12921.3|1.5e+02,ATP13|PF12921.3|5.7e+02,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|69,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|7.2e+03,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|97,TPR_14|PF13428.2|4.8e+03,TPR_19|PF14559.2|0.41,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|6e+02,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|1.4e+04 R_Transcript_76034:317-2167(+)
ATGGATGTAATGATACCAGTTAAGCAAACCCATGAAGGGTTTTGCTCATTTCAATGTATAGCAAGTAGTAGTAATAGTATGCAAAGCAGTGTTTCAAGAAATAGAACTAGTACTAGGGTTCCTGCCAATTTTGGCTCCTGTAAGGTTTTTGGTGCCTCTAAGGTTGGTTCTTTGGATTTTTCAGTTGATTTGAGGAAAGATTATGGGACTAGTAAACATAGGGAGAAGTGGGTCTGTGCTGTGTCCAAGAATGAACATTTTGCTATTAATGGTAGGGCTTCTCACCATGAGAGGCACTCTGGTGAGCATCTTAATGGTGATAGTTCATCTTTGGCTTCTTCCCATTCGAGCTATGATGAATTCGAGAGTAATAATTACCTTCGTCGATTAGTTAGGAACGGGGAGCTTGATGAAGGGTTTAAATTCCTGGAAAGTATGGTTTATCGCGGTGATATCCCTGATATCATTCCTTGTACCAGTTTGATTCGTGGGTTTTGTAGAATTGGTAAAACTAGGAAGGCCACTAGGGTCTTGGATATTCTTGGGGAATCTGGAGCTGTCCCTGATGTGATAACTTATAATGTTTTGATTAGTGGTTATTGCAAATCGGGGGAGATTAATAATGCGCTCAGGCTTCTTGACCGTATGAGTGTTGCTCCGGATGTTGTGACGTACAATACTATTATGCGTTGTTTGTGTGATAGTGGGAAACTTAAGCAGGCAATGGAGGTTCTTGATCGACAGTTGCAAAGAGAGTGTTACCCAGATGTGATCACTTACACAATTTTGATCGAAGCAACTTGCAAGGAATGTGGAGTTGGTCAGGCAATGATGCTTCTAGATGAAATGAGGAGTAAAGGTTGCAAGCCTGATGTGGTCACCTATAATGTTCTTATTAATGGGATTTGTAAAGAAGGAAGATTAGATGAGGCAATAAAGTTTTTGAACAGCATGCCTTCCTTTGGTTGCCAACCTAATGTGATTACCCACAATATTATCTTACGAAGCATGTGTAGCACGGGAAGGTGGATGGATGCTGAGAAATTACTGTCTGATATGCTCAGTAAAGGCTGTTCTCCTAGCGTTGTCACCTTCAATATTCTGATCAATTTCTTGTGTAGGAAGGGCTTATTGGGTCGAGCAACTGACATGTTGGAGAAGATGCCAAAACATGGATGTACTCCAAATTCCTTGAGTTACAACCCATTGCTCCATGCATTCTGCAAAGAAAAGAAGATGGAAAGGGCGATTGAATACTTAGGCATAATGGTCTCTCGGGGGTGTTATCCTGATATAGTCACCTACAATACTCTGCTTACAGCCTTGTGCAAAGATGGGAAAGTTGATGTAGCTGTAGAGATACTGAATCAATTAAGTAGCAAGGGTTGCTCACCAGTTTTGATAACATATAACACTGTGATTGATGGGCTATCAAAGGCGGGCAAGACAGAACAAGCTATAAAGCTCCTGGATGAGATGCGGGGAAAGGGTTTGAAACCCGATATAATAACTTACTCTTCACTTGTGTCAGGTCTCAGTAGAGAGGGGAAGATTGATGAAGCAATTAGGTTTTTCCATGAGATAGAAGGATTAGGTATCAGACCTAATACAATCACGTATAACTCCATCATGTTGGGACTGTGCAAAGCTCGCGATACTTCTCGTGCAATCGACTTCTTTGCTTATATGGTATCAAGAGGGTGCAAACCTACTGAAGCTACATACACCATCCTTATTGAGGGTATTGCCTATGAAGGGCTAGCTAAGGAGGCTTTGGAGTTGCTGAATGAGCTGTGTTCTAGAGGATTTGTGAAGAAAAGTTCGGCAGAGCAGGTAGCTGTGAAGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76034.p1 GENE.R_Transcript_76034~~R_Transcript_76034.p1 ORF type:complete len:617 (+),score=101.90,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|6.6e-09,PPR_2|PF13041.2|2.8e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|4e-18,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|3.7e-14,PPR_2|PF13041.2|3.1e-15,PPR_2|PF13041.2|3e-15,PPR_2|PF13041.2|1.7e-16,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|4.2e-16,PPR_2|PF13041.2|50,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.00043,PPR_1|PF12854.3|1.1e-13,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.6e-08,PPR_1|PF12854.3|4.5e-17,PPR_1|PF12854.3|6.5e-09,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-11,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|3.9e-06,PPR|PF01535.16|0.55,PPR|PF01535.16|0.013,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.00034,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.00013,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|0.0012,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|26,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|0.048,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|9.9e-05,PPR_3|PF13812.2|6.6e-07,PPR_3|PF13812.2|0.63,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|4.1,ATP13|PF12921.3|10,ATP13|PF12921.3|12,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|94,ATP13|PF12921.3|8.7,ATP13|PF12921.3|1.5e+02,ATP13|PF12921.3|5.7e+02,TPR_14|PF13428.2|7.7e+02,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|69,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|1.6e+03,TPR_14|PF13428.2|7.2e+03,TPR_14|PF13428.2|6.3e+03,TPR_14|PF13428.2|3.1e+02,TPR_14|PF13428.2|97,TPR_14|PF13428.2|4.8e+03,TPR_19|PF14559.2|0.41,TPR_19|PF14559.2|1.9e+02,TPR_19|PF14559.2|6e+02,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|1.4e+04 R_Transcript_76034:317-2167(+)
MDVMIPVKQTHEGFCSFQCIASSSNSMQSSVSRNRTSTRVPANFGSCKVFGASKVGSLDFSVDLRKDYGTSKHREKWVCAVSKNEHFAINGRASHHERHSGEHLNGDSSSLASSHSSYDEFESNNYLRRLVRNGELDEGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTRKATRVLDILGESGAVPDVITYNVLISGYCKSGEINNALRLLDRMSVAPDVVTYNTIMRCLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKECGVGQAMMLLDEMRSKGCKPDVVTYNVLINGICKEGRLDEAIKFLNSMPSFGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLSKGCSPSVVTFNILINFLCRKGLLGRATDMLEKMPKHGCTPNSLSYNPLLHAFCKEKKMERAIEYLGIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKAGKTEQAIKLLDEMRGKGLKPDIITYSSLVSGLSREGKIDEAIRFFHEIEGLGIRPNTITYNSIMLGLCKARDTSRAIDFFAYMVSRGCKPTEATYTILIEGIAYEGLAKEALELLNELCSRGFVKKSSAEQVAVKM*

Click here to download the sequence:
Link to NCBI Protein BLAST