Transcript Information: R_Transcript_76039.p1


Annotated TAIR IDAT1G48850.1
Annotated Gene Namechorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative
Annotated Gene Symbol(s)EMB1144
Annotation TypeOrtholog
Chromosome Positionchr1:18065154-18067956 | Reverse length=436
E-Value1.2E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1167.15211504424
Replicate 2146.59060884256
Replicate 3157.57534332696
Condition 2: 8 Hour
Replicate 1166.81694292826
Replicate 2212.6836386995
Replicate 3230.54203169227
Condition 3: 24 Hour
Replicate 1178.9975152571
Replicate 2162.69530017227
Replicate 3159.91017122847


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76039.p1 GENE.R_Transcript_76039~~R_Transcript_76039.p1 ORF type:complete len:438 (+),score=102.41,Chorismate_synt|PF01264.17|2.9e-141 R_Transcript_76039:314-1627(+)
ATGGCGTCTTCTCTCTCCACCAAACCTTTTCTCGGTTCCAGCTCCTCCGGTACTTCTTCCGGTCTCGGATCTCTTAACTCTGGCTCTCGCAAGCTATTATTTCCTTCTTCCCATGTCTCCTTCCGTCGATCTCCCCGTAAACTCGAGGTTCAGGCAGCAGGAAGTACATATGGAAATTATTTCCGTGTAACAACATATGGTGAATCACATGGTGGTGGTGTTGGTTGTGTGATTGATGGCTGTCCCCCTAGACTTCCTATCAGCGAGGATGATTTACAAGAAGATCTTGATAGAAGGAGGCCTGGCCAAAGCCGGATCACTACTCCGAGGAAGGAAACAGATACTTGCAAGATAATTTCAGGAGTATCTGAAGGCGTGACTACCGGATCACCAATTGCAGTGAATGTACCCAATACTGATCAAAGGGGACATGACTACAAGGAGATGTCCTTGGCTTATAGACCTTCTCATGCTGATGCAACTTATGATTTCAAGTATGGTGTCAGATCTATACAGGGTGGTGGACGATCTTCTGCTAGAGAAACTATTGGTAGAGTTGCAGCTGGAGCCATAGCTAAGAAGATTCTAAAGAAGTTTTCCGGCACCGAGGTCCTTGCCTATGTTTCCCAAGTGCACAATGTTGTGCTGCCAGAGGGTTTGGTCAATCATGAAACTTTGAGTCTTAAAGAGATAGAGAGTAATATTGTCAGATGCCCTGATCCAGAATACGCAGAAAAAATGATTGCTGCCATTGATGCCGTCCGAGTGAAAGGGGATTCAGTTGGCGGTGTTGTCACATGTATAGTTCGGAATGCTCCACGTGGACTTGGTTCACCGGTCTTTGACAAACTGGAAGCTGAGCTGGCTAAAGCTGCTATGTCATTACCTGCTACTAAGGGTTTTGAATTTGGTAGTGGCTTTGCAGGTACCTTTATGACTGGGAGTGAACATAATGATGAGTTCTATATGGATGAACAGGGAAAAATTAGGACAAAAACAAACCGCTCTGGTGGTATACAGGGAGGAATATCCAATGGTGAAATCATCAACATGAGAATAGCATTCAAGCCAACTTCTACAATTGGAAAAAAGCAGCATACTGTTACGAGAAGCAAGGAGGAGACTGACCTTATTGCACGAGGACGACATGATCCTTGTGTTGTTCCACGAGCGGTGCCAATGGTTGAAGCCATGGTTGCATTGGTGCTGGTTGATCAACTGATGGCACAATATGCACAGTGTGAGCTGTTCCCGATCAACCCTGCCCTGCAGGAACCCATGGAGTTGCCTGAGCTAGATGAAGCAAATGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76039.p1 GENE.R_Transcript_76039~~R_Transcript_76039.p1 ORF type:complete len:438 (+),score=102.41,Chorismate_synt|PF01264.17|2.9e-141 R_Transcript_76039:314-1627(+)
MASSLSTKPFLGSSSSGTSSGLGSLNSGSRKLLFPSSHVSFRRSPRKLEVQAAGSTYGNYFRVTTYGESHGGGVGCVIDGCPPRLPISEDDLQEDLDRRRPGQSRITTPRKETDTCKIISGVSEGVTTGSPIAVNVPNTDQRGHDYKEMSLAYRPSHADATYDFKYGVRSIQGGGRSSARETIGRVAAGAIAKKILKKFSGTEVLAYVSQVHNVVLPEGLVNHETLSLKEIESNIVRCPDPEYAEKMIAAIDAVRVKGDSVGGVVTCIVRNAPRGLGSPVFDKLEAELAKAAMSLPATKGFEFGSGFAGTFMTGSEHNDEFYMDEQGKIRTKTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQHTVTRSKEETDLIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCELFPINPALQEPMELPELDEANV*

Click here to download the sequence:
Link to NCBI Protein BLAST