Transcript Information: R_Transcript_76127.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value5.7E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1187.77791638658
Replicate 2293.57422592254
Replicate 3228.30964672806
Condition 2: 8 Hour
Replicate 1178.12999461622
Replicate 2152.14503318914
Replicate 3177.59018533178
Condition 3: 24 Hour
Replicate 1295.29698609681
Replicate 2431.78921604097
Replicate 3164.74257115482


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76127.p1 GENE.R_Transcript_76127~~R_Transcript_76127.p1 ORF type:complete len:393 (+),score=60.56,Chal_sti_synt_N|PF00195.15|3.3e-118,Chal_sti_synt_C|PF02797.11|7.2e-71,ACP_syn_III_C|PF08541.6|2.2e+03,ACP_syn_III_C|PF08541.6|2.7e-07,ACP_syn_III|PF08545.6|9e-07,FAE1_CUT1_RppA|PF08392.8|2.1e-06 R_Transcript_76127:228-1406(+)
ATGGCCACATCAGTGCAGGAGATCAGAAAGGCGCAGCGGGCCGATGGCCCGGCCACCATTTTGGCCATCGGAACCGCCACGCCACCCAACTGTGTGTACCAAGATGACTACCCTGATTACTACTTTCGTGTCACCAAGAGTGAGCACATGACCGATTTGAAGGCCAAGTTCAAGCGCATGTGTGACAAGTCAATGATCCAAAAGCGTTACATGTACTTGACGGAAGACATCCTAAAGGAGAACCAAAATATGTGTGAGTATATGGGGTCATCCTTAGACACTCGGCAAGACATGGTGGTCGCTGAAGTCCCAAGGCTTGGGAAAGAGGCTGCTGTTAAGGCTATTAAAGAGTGGGGCCAACCCAAGTCTAAGATTACTCATCTTATTATGTGCACTACCTCTGGTGTTGACATGCCTGGGGCTGACTATCAGTTAACCAAGCTCCTTGGACTGCGTCCGTCGGTCCGTCGTTTCATGCTCTACCAACAAGGTTGCTTTGCTGGTGGGACGGTCCTCCGTCTGGCCAAGGACCTCGCCGAAAACAACCGTGGGGCCCGTGTTTTGGTTGTTTGCTCCGAGATCACCGCCATTTGCTTCCGTGGGCCCACCGAGACCCACCTCGACTCCATGGTGGGACAGGCTTTGTTTGGTGATGGAGCTGGAGCTATCATTGTTGGTGCTGACCCTGATGACTCAATTGAGCGGCCCTTGTTCCAGATGGTCTGGACGGCCCAAACTCTTCTTCCGGACTCCGAAGGGGCCATTGATGGACACTTGCGTGAAGTGGGCCTTACATTCCATTTATTGAAGGATGTTCCTGGGCTCATTTCCAAGAACATTGACAAGGCACTTAATGACGCCTTCAGCCCATTAGGTATCTCTGACTGGAACTCCCTCTTCTGGATCGCCCATCCTGGTGGCCCGGCAATTCTGGATCAGGTTGAATCTAAATTGGGCCTCAAAGAAGAGAAGCTCACCGCCACTCGTAACGTGTTGCGTGACTTTGGCAACATGTCTAGTGCTTGTGTCCTCTTCATTCTTGATGAAATGAGGAAAAAGTCTCTCAAAGAAGGCCACGTCACCACCGGCGAGGGCCTTGACTGGGGCGTTCTGTTCGGGTTCGGACCGGGCCTCACCGTCGAGACCGTTGTACTGCACAGTGTGCCAGTAAGCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76127.p1 GENE.R_Transcript_76127~~R_Transcript_76127.p1 ORF type:complete len:393 (+),score=60.56,Chal_sti_synt_N|PF00195.15|3.3e-118,Chal_sti_synt_C|PF02797.11|7.2e-71,ACP_syn_III_C|PF08541.6|2.2e+03,ACP_syn_III_C|PF08541.6|2.7e-07,ACP_syn_III|PF08545.6|9e-07,FAE1_CUT1_RppA|PF08392.8|2.1e-06 R_Transcript_76127:228-1406(+)
MATSVQEIRKAQRADGPATILAIGTATPPNCVYQDDYPDYYFRVTKSEHMTDLKAKFKRMCDKSMIQKRYMYLTEDILKENQNMCEYMGSSLDTRQDMVVAEVPRLGKEAAVKAIKEWGQPKSKITHLIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAICFRGPTETHLDSMVGQALFGDGAGAIIVGADPDDSIERPLFQMVWTAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIDKALNDAFSPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLTATRNVLRDFGNMSSACVLFILDEMRKKSLKEGHVTTGEGLDWGVLFGFGPGLTVETVVLHSVPVSN*

Click here to download the sequence:
Link to NCBI Protein BLAST