Transcript Information: R_Transcript_76164.p1


Annotated TAIR IDAT1G10600.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 2
Annotated Gene Symbol(s)AMSH2
Annotation TypeOrtholog
Chromosome Positionchr1:3503765-3505190 | Forward length=223
E-Value1.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8256870797057
Replicate 25.0285257299537
Replicate 35.9673013905943
Condition 2: 8 Hour
Replicate 14.423916776183
Replicate 26.2009168131019
Replicate 35.3387090059962
Condition 3: 24 Hour
Replicate 15.4982983696602
Replicate 25.1894726801358
Replicate 36.0696996190556


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76164.p1 GENE.R_Transcript_76164~~R_Transcript_76164.p1 ORF type:complete len:238 (+),score=33.81,JAB|PF01398.17|2.5e-15 R_Transcript_76164:1629-2342(+)
ATGGAGGAAATTATCCAACTGACCAAATCCACTCAAGTCCAAGGGTTTAAGAATATGGTCACACATTTTCCTTCTACTGCAATCTCTTGCACAGAGGTTGCACCTAATGCCACACCAATTTCCCATATATCAGCATGTGATTCACGATATGGACATTCAGATTCCTCATCTCATGAGCTTAAAAGTGTGCATATTTCAGCTCAATTAATGGAGGATTTTCTTCAACTTGCTAGGAAGAACACTGACAAGGATCTTGAGACGTGTGGGGTTCTTGGTGCTTTTCTTAAAGAGGAGACATTCTATGCTACCACGTTGATTATACCAAAACAGGAGGCAACTTCTAGTTCATGTCAGGCACTAAAGGAAGAGGAGATTTTTAACATACAGAATGACAGATCCCTTGTCCCTGTAGGATGGATTCATACTCATCCCTCCCAAAGTTGTTTTATGTCTTCGATAGATCTGCACACGCAGTATCCATATCAGGTCATGGTACCAGAGGCCATAGCCATTGTCATGGCACCGACTGATAAGACAAGGAATTTCGGAATATTCCGATTGACTGATCCTAGTGGCATGACTGTTCTTAGAGACTGCCAAGAGGAGGGGTTCCACCCTCACCGGGATTCTAGTGATGGGAGGCCCTTATACGAGCAGTGTTCACATGTTTATATCAACCCAAATCTGAGATTTGAAATCTTCGATTTACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76164.p1 GENE.R_Transcript_76164~~R_Transcript_76164.p1 ORF type:complete len:238 (+),score=33.81,JAB|PF01398.17|2.5e-15 R_Transcript_76164:1629-2342(+)
MEEIIQLTKSTQVQGFKNMVTHFPSTAISCTEVAPNATPISHISACDSRYGHSDSSSHELKSVHISAQLMEDFLQLARKNTDKDLETCGVLGAFLKEETFYATTLIIPKQEATSSSCQALKEEEIFNIQNDRSLVPVGWIHTHPSQSCFMSSIDLHTQYPYQVMVPEAIAIVMAPTDKTRNFGIFRLTDPSGMTVLRDCQEEGFHPHRDSSDGRPLYEQCSHVYINPNLRFEIFDLR*

Click here to download the sequence:
Link to NCBI Protein BLAST