Transcript Information: R_Transcript_76252.p1


Annotated TAIR IDAT3G54480.1
Annotated Gene NameSKP1/ASK-interacting protein 5
Annotated Gene Symbol(s)SKIP5, SKP5
Annotation TypeOrtholog
Chromosome Positionchr3:20170883-20173325 | Reverse length=274
E-Value4.1E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.799489381574
Replicate 213.131706789575
Replicate 313.696812170895
Condition 2: 8 Hour
Replicate 116.997060891215
Replicate 217.135658593074
Replicate 318.401117295581
Condition 3: 24 Hour
Replicate 112.938420568191
Replicate 211.368690149782
Replicate 313.237924484172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76252.p1 GENE.R_Transcript_76252~~R_Transcript_76252.p1 ORF type:complete len:291 (+),score=51.83,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|1.9e-08,F-box-like|PF12937.3|2.7e+03,F-box|PF00646.29|9.4e-07,F-box|PF00646.29|6e+02 R_Transcript_76252:125-997(+)
ATGGCTTCAATGGCAAAGCAGCAACCTGAACCATCAAACCCCTCTTCAATAATCTCTGAATTATCTTCAGAGCTGCTACTGGGTATCCCCAATATGGGAGAAAACCAACAAAACAAAAACAAGAGCAACAAATGGAGGAGATTATCAAAGCATGGTTCTTCTACCCTTGATTCCCCAATTAATTTGTTGGATGATGGGTGTCTCATGCATATCCTCAGCTTTCTTTCTCCTATCCCAGATCGCTATAACACCGCCCTCGTTTGCCACAGATGGCGTTTCTTGGCGTGCCACCCACGCTTATGGCTGCGGGTAGATCGGACTATCAAGGATTCATCGGAGCATAATGTATTCCCCACTATTGAAGCTGCTGTCTATGCTGCAAGGCCTGGCGATACCATCCTGATTGCAGCTGGAGGGGTCCATATTAGCTCCAACATTCAGATCAAAAAGCCCCTCTGCCTGATTGGTGGCGGTGAGATCCCTGAAGAAACAACTCTTGTTTGTTCTCGAGGCTCTGACAGTGCACTGGAATTTCTTTCGACCTGCAAAATTGCGAATTTAACTGTGAAGGCGGAGCTGGGTTGCTGCTTGCTTCATAGGAGTGGAAGGCTGATAATTGATAGTTGTATTCTCCAATGTGAAACAAATCCTTTGGATTATCTTTCGTGTGCCATTGTGAGCACAGCTGGCGCATCCAAGAAGTTCACATCCCCTCCTCCAAAAGCCTTAGGGGACGGTGTCTCTGTTTCATCTACTCGAATCGAAGGTGGGACCAAGGCGGTTTTGACCAGTGGGACCCTTGTATTGCAGCGGGTAAGAGTCATTTATTGTCTCAGTTCTGTTCTTTTCTGGTTTGAAGTAGAGCACCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76252.p1 GENE.R_Transcript_76252~~R_Transcript_76252.p1 ORF type:complete len:291 (+),score=51.83,F-box-like|PF12937.3|8.6e+03,F-box-like|PF12937.3|1.9e-08,F-box-like|PF12937.3|2.7e+03,F-box|PF00646.29|9.4e-07,F-box|PF00646.29|6e+02 R_Transcript_76252:125-997(+)
MASMAKQQPEPSNPSSIISELSSELLLGIPNMGENQQNKNKSNKWRRLSKHGSSTLDSPINLLDDGCLMHILSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVDRTIKDSSEHNVFPTIEAAVYAARPGDTILIAAGGVHISSNIQIKKPLCLIGGGEIPEETTLVCSRGSDSALEFLSTCKIANLTVKAELGCCLLHRSGRLIIDSCILQCETNPLDYLSCAIVSTAGASKKFTSPPPKALGDGVSVSSTRIEGGTKAVLTSGTLVLQRVRVIYCLSSVLFWFEVEHQ*

Click here to download the sequence:
Link to NCBI Protein BLAST