Transcript Information: R_Transcript_76338.p1


Annotated TAIR IDAT1G80740.1
Annotated Gene Namechromomethylase 1
Annotated Gene Symbol(s)CMT1, DMT4
Annotation TypeHomolog
Chromosome Positionchr1:30342394-30346831 | Forward length=791
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.53316322461
Replicate 212.513197996917
Replicate 313.841749021372
Condition 2: 8 Hour
Replicate 16.2085013017897
Replicate 25.0338478078498
Replicate 37.3982867931435
Condition 3: 24 Hour
Replicate 118.796024637848
Replicate 215.966544054672
Replicate 320.435439920942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76338.p1 GENE.R_Transcript_76338~~R_Transcript_76338.p1 ORF type:5prime_partial len:844 (+),score=168.05,DNA_methylase|PF00145.13|0.06,DNA_methylase|PF00145.13|2.3e-29,Chromo|PF00385.20|8.7e-10,BAH|PF01426.14|1.7e-09 R_Transcript_76338:3-2534(+)
ACCCTTTCTCTCTCTTCTTCTTCCACTTTCCCCAACCCAACCCCCACGTTTCTTCGTCTCTCTCAAAAGAAAAAAGAGAAGAAAAAAATGCTGGAGCTCCCGAACCGGAGTTTCGCAGACCGGAACCCACCGGCCAAGAAGTTAAAGAAAACCCTAAACAATTCTGAAGACGACGACGACTGCAAATTTGTCGGAAAACCGGTTTCCCATGACCAAGCCCTAGATAAATGGCCTCATCGTTATTCCTCTCTTAAGGGCAAAGGAGCAAAGAAATCAATCTCTAGTTCAGAGGAAAATGCAGAGCAAAGTTTTTTGCAAGCACAGTGCCATTATACGGAGGCTCTTGTTGATGGGGAGGTCATCAAACTTTTTGACGATGCTTTTATACAGGCAGAGGAAGGAAAACCCGATTACATAGCGAAAATTGTGGAGTTGTTCGAGACAGTTGACAAGGAGCAATATATTACAGCTCAATGGTTCTATAGGGCTCAGGACACGGTGATTAAAGATCATGGCAACCTTGTAGATGATAGTCGTGTCTTCTTTTCCGAGATAAAAGATGATAATCCCTTGGGATGCATTGTTCGTAAAGTTAAAATTGCTCAAATTGGCCCCAATGTAAGTGATGCAGAAAGGAAAAAAAGGATAGAGTCTTCTGAGTTGTATTGTGATATGAGATATTCATTGCCATTCCTGACATTCGCGAATCTAGATGATGCTCCACAAAACCAGGGTGATGGCAATGAGACGTCATCTACGATTTCAAGTGAGAGCAACTCAAACAATGAACTTGTGGATGTTAGTAGTGGTGGTAAGCAAGATATGTTACCACTGGAAGAAGTTCAAAAGCCTGAGATGACTTTACTTGACCTATATTCTGGTTGTGGAGCCATGTCTACCGGATTGTGTCTTGGTGCATCTCTATCGGGTTCAAAGCTTGTTACTAGGTGGGCAGTTGACATGAACCCCTATGCATGTGAAAGTCTCAGGAATAACCATCCTGAAACTGAGGTAAGGAATGAGATGGCAGAGGATTTTCTCTCTTTGCTAAAGGAGTGGGAGAAACTCTGCAAAGAATTCTTGACAAAAGATTTGTCGATGGAGGGAGCAAGTTCTGAGGAAGATGCTGATGAAGACTCCTCACTTGCTCCTGAAGAATTTGAGGTAGAAAGTTTACTTGATATTTGCTATGGAGATCCCAACAGTGTAAGTAAGCGTGGAGTTTACTTCAAGGTCCGTTGGAAGGGATATGGACCTGATGAAGACACTTGGGAGCCCCTTGATGGTTTAAGCACTTGTGAAGAACGGATAAAGGAGTTTGTTATAAGAGGGCATCGATCAAAATTATTACCCCAACCTGGAGATGTTGATTTTATATGCGGAGGTCCTCCTTGTCAAGGAGTTAGTGGATTCAACCGCTTTAGAGACAAAACTAATCCTTTGAAGGATCCAAAGAATCATCAACTAATTGTTTTCATGGATATAGTAGATTATTTGAAGCCAAAATATGTGCTCATGGAGAATGTTGTTGATATATTGAAATTCGCTGATGGATTCCTGGGGCGTTATGCTGTTGGCCGTCTTGTTGGAATGGATTATCAAGCTCGATTGGGCATTATGGCTGCTGGATCCTATGGTCTTCCTCAATTTCGTTTACGAGTATTTTTGTGGGGTGTTGATAAGTCAAAGAAACTACCACAATATGCCCTGCCAACTCATGATGTAATTACAAGAGGCGGTGTTCCTAATGAGTTTGAGGAAATTTATGTTTCCCATGGCAGAAAAGGCTCTTCTTCGTTGGAAAAGGCTCTTTTACTAATAGATGCCATCTCTGACTTACCACCGGTTACTAATTATGAAGATCAAGATGAAAGACCTTATGGGGATCCTCCGCAAACTGAATTTCAGAGATTTATTAGACTCAGTAGAGCAGATATTATTACTTTTAATGGTTCGGCTGAAGTTGCACAAGATTCCACTCTGTATGATCATCGTCCATTGCAAATGAAAGAAGATGATTATCAAAGAGTGTGCCAAATTCCAAAGCAAAAGGGTGCAAATTTTAGAAATTTGCGTGGTCTACGGGTTAATGCTCAGAACAAGGTGGAATTGGATCCTGATGTTGAACGGGAATATCTTCCCTCAAAAAAACCTTTGGTCCCTGACTATGCAATTTCATTTTGTCGTGGTACATCGAAAAAGCCATTTGGAAGGCTATGGTGGGACGAAACAGTTGCAACTGAGGTAACTAGAGCTGAACCTCATAACCAGGTTGTCCTACATCCTGTGCAGGACAGGGTACTCACAATTCGAGAAAATGCAAGGCTACAAGGCTTCCTTGATTGCTACAAACTTTATGGGCCTGTCAAGGAGAGATATATACAAGTAGGAAATGCTGTAGCAATGCCCGTTGCTCTCGCCCTAGGATATACGTTTGGTAAAGCAATTCAAGGACTCGTCGACGATAAACCCTTGACTTCCTTACCTGTAAAGTTCCCTCGGTGTATTGCTCGTGAATATGACCAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76338.p1 GENE.R_Transcript_76338~~R_Transcript_76338.p1 ORF type:5prime_partial len:844 (+),score=168.05,DNA_methylase|PF00145.13|0.06,DNA_methylase|PF00145.13|2.3e-29,Chromo|PF00385.20|8.7e-10,BAH|PF01426.14|1.7e-09 R_Transcript_76338:3-2534(+)
TLSLSSSSTFPNPTPTFLRLSQKKKEKKKMLELPNRSFADRNPPAKKLKKTLNNSEDDDDCKFVGKPVSHDQALDKWPHRYSSLKGKGAKKSISSSEENAEQSFLQAQCHYTEALVDGEVIKLFDDAFIQAEEGKPDYIAKIVELFETVDKEQYITAQWFYRAQDTVIKDHGNLVDDSRVFFSEIKDDNPLGCIVRKVKIAQIGPNVSDAERKKRIESSELYCDMRYSLPFLTFANLDDAPQNQGDGNETSSTISSESNSNNELVDVSSGGKQDMLPLEEVQKPEMTLLDLYSGCGAMSTGLCLGASLSGSKLVTRWAVDMNPYACESLRNNHPETEVRNEMAEDFLSLLKEWEKLCKEFLTKDLSMEGASSEEDADEDSSLAPEEFEVESLLDICYGDPNSVSKRGVYFKVRWKGYGPDEDTWEPLDGLSTCEERIKEFVIRGHRSKLLPQPGDVDFICGGPPCQGVSGFNRFRDKTNPLKDPKNHQLIVFMDIVDYLKPKYVLMENVVDILKFADGFLGRYAVGRLVGMDYQARLGIMAAGSYGLPQFRLRVFLWGVDKSKKLPQYALPTHDVITRGGVPNEFEEIYVSHGRKGSSSLEKALLLIDAISDLPPVTNYEDQDERPYGDPPQTEFQRFIRLSRADIITFNGSAEVAQDSTLYDHRPLQMKEDDYQRVCQIPKQKGANFRNLRGLRVNAQNKVELDPDVEREYLPSKKPLVPDYAISFCRGTSKKPFGRLWWDETVATEVTRAEPHNQVVLHPVQDRVLTIRENARLQGFLDCYKLYGPVKERYIQVGNAVAMPVALALGYTFGKAIQGLVDDKPLTSLPVKFPRCIAREYDQD*

Click here to download the sequence:
Link to NCBI Protein BLAST