Transcript Information: R_Transcript_76399.p1


Annotated TAIR IDAT5G52950.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21473887-21476939 | Reverse length=948
E-Value3.2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4082847273241
Replicate 23.5198476331416
Replicate 34.3312934636
Condition 2: 8 Hour
Replicate 14.3196311456641
Replicate 25.4921464171333
Replicate 35.8028540774726
Condition 3: 24 Hour
Replicate 15.616383639526
Replicate 24.6647087517108
Replicate 36.2292492871092


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76399.p1 GENE.R_Transcript_76399~~R_Transcript_76399.p1 ORF type:complete len:1026 (+),score=192.67 R_Transcript_76399:126-3080(+)
ATGGCGGACCACCGAAACCCCAACTCCTTACCACCACCCAACTACTCCAAAACCGAACGAATAGTCCTCTTAATCGACCTAACCCCACTTCTCCATCTCCAAAACCCTAACTCTTACCTCACTTCCATCCTTTCTTCTTCCAAAACCCTCCTCTCTTTCCCTCCTCTATCATCTTCTCTCTCCTCCTTCAAACTCTTCTTCTCTTCTCTTTCCCCTCTCCTATCTTCCTCCTCTCTTCCCTCCCCCAATTCCCTCTCTTTCAATCATTCCCACCAAACCCTAAGTTCTCTCTCCCAAACCCTAAATTCCCTAATTCAGTCCAGCCTTGCAGGTTCGGGATCAGTGTCAAAGGCGGGGTTTACGTCGAGCTCCATGGCCCAGGTAATTCATGACTATGCTTGGGATTTGTTTGATTCTGATTCGAATGTGGATGATGGTTTGTTGGGTTTTGCTAGGGTTAGGTCGAATTTGGTTGTTTTGTTCTCTCCTGTTTGTAGATCTTTTAATGATTTGTGTAGTTTTATGGATCTTGATGGTAAAGATGCTTTGTTGAGTGATAATTTTAGGGATAAGTTTGGGAGTGTTTTTGGGAGTGTGAAGGATGCTTTTGTTAGTAGGGATATTCATCTTAGCTGGGTTGATGTCAGATTTGAGATTGAAAATGGTGAATTAAGTAGTGATTCTGAGTGTGAGAGGTTGTTTAGGAGCACGGTTAAGGGTTTGGGGTGGGGGTATTGTTCGACCAATTCGATTGTCTTGGGTTCTGCTCTCGTTTCGTTTGGTCTTATTTATCCTATGATGCTTGGGGTTTTGTCGATTTGTTATGCTAATAGTTCTGTTGATGTGAGGAAGAAAGTTTCTGGACAATTGAATCTTGAGATATTGGATGTGAGTGGGAAACCTTTGGAATGTAAGTATTGTGATCTCGAACTGCTTGATATTAAGATGGTGAAAGGGGTTAGGCCTAACGGACTGTCACAACTATTGGAGAGCGGTACAGTGGGACCGGAAATTGTGCGCCAATGTGGCGGAGTTTTGGAGTGTTTTGGTGATGGGCCAGTGAAGATTGATGTGAAATCTCTATGTAGAAGCAATAAGCTTAACAAGATTGAGTTGCATGCTTCTGATGTGGTGCTAGTAAATGAGATGACTGTAGATTCAAAGAAAAATAAAGAGGAATCTTCTAGAAATTTCTTTGCCGACAGAGTTATTGACCTGCTTCTGAAAGAAGCAGACTGGTCTGTCAAGTGGAAATCACCACCTCTTTGGCCGATTCTTTTAAGCTTTCTGTATAGGAGAGGTTACTGGGCTTTGTTGTCTTTGACAAATGCTGATTGTAGCAGCACAACTATGGGTGCACTTAAGCCTTTTACTATTCATTCAGCCGTTCTTTTCATTCCAAAAAATGATACGAATTCTCACCGTGGCACACAATTTGATCTAAGTGGACTGAATCTGTGCGAGTCAAAAGTAGAGACAGGTGAAAATGTTGATTCTGTAATACAAGGGGTCGAAAGTAGAAGAAAACATAAAAAGCATCCTCATAGGGTTAAGGATCTCTCTTGGAGCTCATTCTGCAAATCGGCTTATCAACACTGTGATATCGAACTTGAGGAAGTGTACTTTTCCAAGGCGGGTGATACTGCAAAGAAGTTAAAATTTCTGAAATGCTGGATGAAACAAGTGGTGCAAAACTGCTCATTTCTTTCTAGTAAACCAGACATTCGAAAGACTCATTCACAGGATGGAGAGAAAACTGCAGAGAGATTAAGCCAATTGCAGCAAGAAAGCGAGCAGCCACTTCCTACCTTGGTTGAAGGAATTGCTGAGAAGGGGATATACATAGAGGAAGCTACAGCTTATTCACCAGAAGCTGCAGAAGCTTTCTTCAGCAATCTATCTGAGAGAATCCAACATGGACTTCAATCAGGAGTTGACTTGGTGGCGTTTTCCCAACGGGTTGTGTGCTCATGTCTATACTGGCTAAAATGGAAGCTAGGAGCAGATACCCTTGAAGAAGGTCAAGCCTCTATTGAGAAATCTGATTGTAGCACCAGTGGGGGAATAGTGGCTGGCGAGCTCATCAAATTACTGCTTAAGGATCCGAAACAGTTAGCAGGAAAGCACAAAGATAACGGTCCTTCCTCCAAAGAGCACAACAAAAAGCCATTAAAAATCTCTTCTGAAGATAGAGTTAGAGAATATGAACTGCAGATTTTGTTTCGAATGGAGATACTTCAATCAGAAGCTGCAGTTGGCATTAGAGATTCCATTAAGCACAAATTTGTCAAGCAAATTTGCTCTCTATTAGAGTTTATTCAATGTAACATGGAAGATGGATTTTTTGGAGACTTCAATCTTACTGATTATGTGGGCAGGAACATCAGAAGCAGGTATTCGCAGAATCTCCCAAGCATTGTGCACAGAATCTATGAGCAAATGGATCTTCTTCTGTTTGATGATGAGGATGAGTCCCCTAGTCCTTTGCTCAACAGTGAAGACAGCAGTCAGTCATGGAGAGTAGGGGATAATGATAGAGGAAGCGAACCTAATTCAACAGATGATTCATTTTCTGGACCTTCAAGATATAATGAACAAAGTCAGAAAGAAAATGAGAGAGCTACTTATGATAGAAAGCTGGTTGAAGCTCAAGAGAGGAGAGAGAGGGCACTAAGGTTTGCATCTTTTACAAGAAGAGCCATCCCAGAATTGCAGAGAGTTTGGGCACCAAAGCCACCAAAGCTTACCAGGTCACAGTCAGACTCTTTTCGCAGGTCCAAGAGAAAGAGTCGGCGTAGGGAAAGCTATGACATGGTGTGTGAAACCCCTGTGAGCGCAGCTAAGAAATGCTTATTCCCCCGAGAAGAGTGTAGGGAGGATGGGGGAAGTTCGACTAGTTCTGTTCACAAGGCTTTGTTTCAAGATGAGTCATTCCATCCAGATTGGAGACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76399.p1 GENE.R_Transcript_76399~~R_Transcript_76399.p1 ORF type:complete len:1026 (+),score=192.67 R_Transcript_76399:126-3080(+)
MADHRNPNSLPPPNYSKTERIVLLIDLTPLLHLQNPNSYLTSILSSSKTLLSFPPLSSSLSSFKLFFSSLSPLLSSSSLPSPNSLSFNHSHQTLSSLSQTLNSLIQSSLAGSGSVSKAGFTSSSMAQVIHDYAWDLFDSDSNVDDGLLGFARVRSNLVVLFSPVCRSFNDLCSFMDLDGKDALLSDNFRDKFGSVFGSVKDAFVSRDIHLSWVDVRFEIENGELSSDSECERLFRSTVKGLGWGYCSTNSIVLGSALVSFGLIYPMMLGVLSICYANSSVDVRKKVSGQLNLEILDVSGKPLECKYCDLELLDIKMVKGVRPNGLSQLLESGTVGPEIVRQCGGVLECFGDGPVKIDVKSLCRSNKLNKIELHASDVVLVNEMTVDSKKNKEESSRNFFADRVIDLLLKEADWSVKWKSPPLWPILLSFLYRRGYWALLSLTNADCSSTTMGALKPFTIHSAVLFIPKNDTNSHRGTQFDLSGLNLCESKVETGENVDSVIQGVESRRKHKKHPHRVKDLSWSSFCKSAYQHCDIELEEVYFSKAGDTAKKLKFLKCWMKQVVQNCSFLSSKPDIRKTHSQDGEKTAERLSQLQQESEQPLPTLVEGIAEKGIYIEEATAYSPEAAEAFFSNLSERIQHGLQSGVDLVAFSQRVVCSCLYWLKWKLGADTLEEGQASIEKSDCSTSGGIVAGELIKLLLKDPKQLAGKHKDNGPSSKEHNKKPLKISSEDRVREYELQILFRMEILQSEAAVGIRDSIKHKFVKQICSLLEFIQCNMEDGFFGDFNLTDYVGRNIRSRYSQNLPSIVHRIYEQMDLLLFDDEDESPSPLLNSEDSSQSWRVGDNDRGSEPNSTDDSFSGPSRYNEQSQKENERATYDRKLVEAQERRERALRFASFTRRAIPELQRVWAPKPPKLTRSQSDSFRRSKRKSRRRESYDMVCETPVSAAKKCLFPREECREDGGSSTSSVHKALFQDESFHPDWRP*

Click here to download the sequence:
Link to NCBI Protein BLAST