Transcript Information: R_Transcript_76418.p1


Annotated TAIR IDAT1G42480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15936297-15938692 | Forward length=182
E-Value1.2E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.239034040119
Replicate 228.64110723454
Replicate 332.656784880669
Condition 2: 8 Hour
Replicate 120.718808801515
Replicate 220.870156385107
Replicate 319.640973543085
Condition 3: 24 Hour
Replicate 135.555168116752
Replicate 236.532557034136
Replicate 330.193808003976


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76418.p1 GENE.R_Transcript_76418~~R_Transcript_76418.p1 ORF type:complete len:195 (+),score=46.72,DUF3456|PF11938.4|2.6e-30 R_Transcript_76418:191-775(+)
ATGGCGGTAATATCATCATCGATTTGCAGGCTTGCAATAATATTAGGGTTAATAGCAGTGTCCATTTCAATCGATGATAAATGCGCTGCTTGCAATGCAGTTGCGGGAGAGCTTGAGATTGGACTCGCTAATGAAAAACCAAGGAATCATTTGGATCTGAGAAATCGCTTGGATTCTAAAGGTCAGCGTAGAGGAAAGGTAATTGATTACAGATTAAGTGAGCTGAGAGTGGTTGAACTCTTGGATGGCCTTTGTGAGAAGATGCAAGATTACACCCTTCAGAAGAAGATCAACTCGAAACAAGAAGAATGGATTAAAGTTAAATCCTGGGAAAACCTCACCATTAACAAACAAGAAGCAAGAGCATATTCTAAAGATATATCGTCATACTGTGGAAGGTTGCTAGAGCAAACAGAAGATGAGTTGGCAGAATTGATTAAAAAAGGGTCTGTTAAACCTGGAGGTGTGGGCAAAGTATTGTGTGAGGATCTCAGCCAACACTGCACAAAGACTAGTGGCTCACAAGGGAATGCTGACAGTGATGATGATGATAATGATGATGATGATGATGATGATGAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76418.p1 GENE.R_Transcript_76418~~R_Transcript_76418.p1 ORF type:complete len:195 (+),score=46.72,DUF3456|PF11938.4|2.6e-30 R_Transcript_76418:191-775(+)
MAVISSSICRLAIILGLIAVSISIDDKCAACNAVAGELEIGLANEKPRNHLDLRNRLDSKGQRRGKVIDYRLSELRVVELLDGLCEKMQDYTLQKKINSKQEEWIKVKSWENLTINKQEARAYSKDISSYCGRLLEQTEDELAELIKKGSVKPGGVGKVLCEDLSQHCTKTSGSQGNADSDDDDNDDDDDDDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST