Transcript Information: R_Transcript_76421.p1


Annotated TAIR IDAT1G42480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15936297-15938692 | Forward length=182
E-Value2.1E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7292278799207
Replicate 20.77354791007414
Replicate 30.36168533046557
Condition 2: 8 Hour
Replicate 10.64436486703277
Replicate 20
Replicate 30.47767396369439
Condition 3: 24 Hour
Replicate 12.2957807227704
Replicate 20.81256216965285
Replicate 30.57599222860256


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_76421.p1 GENE.R_Transcript_76421~~R_Transcript_76421.p1 ORF type:complete len:190 (+),score=31.02,DUF3456|PF11938.4|2.4e-30 R_Transcript_76421:191-760(+)
ATGGCGGTAATATCATCATCGATTTGCAGGCTTGCAATAATATTAGGGTTAATAGCAGTGTCCATTTCAATCGATGATAAATGCGCTGCTTGCAATGCAGTTGCGGGAGAGCTTGAGATTGGACTCGCTAATGAAAAACCAAGGAATCATTTGGATCTGAGAAATCGCTTGGATTCTAAAGGTCAGCGTAGAGGAAAGGTAATTGATTACAGATTAAGTGAGCTGAGAGTGGTTGAACTCTTGGATGGCCTTTGTGAGAAGATGCAAGATTACACCCTTCAGAAGAAGATCAACTCGAAACAAGAAGAATGGATTAAAGTTAAATCCTGGGAAAACCTCACCATTAACAAACAAGAAGCAAGAGCATATTCTAAAGATATATCGTCATACTGTGGAAGGTTGCTAGAGCAAACAGAAGATGAGTTGGCAGAATTGATTAAAAAAGGGTCTGTTAAACCTGGAGGTGTGGGCAAAGTATTGTGTGAGGATCTCAGCCAACACTGCACAAAGACTAGTTGGAGATCAAAAAAGGAGATTCTGTTGGACAAAATCACTAAAATAAAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_76421.p1 GENE.R_Transcript_76421~~R_Transcript_76421.p1 ORF type:complete len:190 (+),score=31.02,DUF3456|PF11938.4|2.4e-30 R_Transcript_76421:191-760(+)
MAVISSSICRLAIILGLIAVSISIDDKCAACNAVAGELEIGLANEKPRNHLDLRNRLDSKGQRRGKVIDYRLSELRVVELLDGLCEKMQDYTLQKKINSKQEEWIKVKSWENLTINKQEARAYSKDISSYCGRLLEQTEDELAELIKKGSVKPGGVGKVLCEDLSQHCTKTSWRSKKEILLDKITKIKG*

Click here to download the sequence:
Link to NCBI Protein BLAST